Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b10f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   7.6  

>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -1

Query: 384 ISRNCSKVMSCTRATTQ*RDVLHDVKERP--SKLKLALRQPW 265
           ++ +C K  +     T   ++ H VKE P     + ++ QP+
Sbjct: 25  LASDCDKNQNTEHNYTHNNEMYHSVKEEPIYESCRFSINQPY 66


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 96  CGWMKQTALPKYSKA 140
           CGW +   LPK ++A
Sbjct: 579 CGWPQHMLLPKGTEA 593


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 228 TENSCEAATGFTGD 187
           T  SCE AT ++GD
Sbjct: 206 TSQSCENATLYSGD 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,465
Number of Sequences: 336
Number of extensions: 3024
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)