Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b10f
         (582 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK172848-1|BAD18812.1|  563|Homo sapiens protein ( Homo sapiens ...    96   9e-20
BC025926-1|AAH25926.1|  551|Homo sapiens NCLN protein protein.         95   2e-19
BC019091-1|AAH19091.2|  563|Homo sapiens nicalin homolog (zebraf...    95   2e-19
BC013283-1|AAH13283.2|  563|Homo sapiens nicalin homolog (zebraf...    95   2e-19
BC010064-1|AAH10064.2|  563|Homo sapiens nicalin homolog (zebraf...    95   2e-19
CR533566-1|CAG38597.1|  552|Homo sapiens LOC56926 protein.             94   3e-19
AL731721-1|CAI14547.1|  235|Homo sapiens nudix (nucleoside dipho...    31   2.2  

>AK172848-1|BAD18812.1|  563|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24009 fis, clone KAT07785. ).
          Length = 563

 Score = 95.9 bits (228), Expect = 9e-20
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +2

Query: 143 LPFYLFVALP-IFIIMSPVNPVA-ASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTS 316
           LP    V LP + ++++P  P A A+HEF+VYRMQQYDL   P+G R+A  N E R++ +
Sbjct: 18  LPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAA 77

Query: 317 WSTSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQ 493
              SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  
Sbjct: 78  EVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVARQFMEIEPEMLAM 137

Query: 494 EINAPVYFA 520
           E   PVYFA
Sbjct: 138 ETAVPVYFA 146


>BC025926-1|AAH25926.1|  551|Homo sapiens NCLN protein protein.
          Length = 551

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +2

Query: 143 LPFYLFVALP-IFIIMSPVNPVA-ASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTS 316
           LP    V LP + ++++P  P A A+HEF+VYRMQQYDL   P+G R+A  N E R++ +
Sbjct: 7   LPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAA 66

Query: 317 WSTSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQ 493
              SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  
Sbjct: 67  EVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAM 126

Query: 494 EINAPVYFA 520
           E   PVYFA
Sbjct: 127 ETAVPVYFA 135


>BC019091-1|AAH19091.2|  563|Homo sapiens nicalin homolog
           (zebrafish) protein.
          Length = 563

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +2

Query: 143 LPFYLFVALP-IFIIMSPVNPVA-ASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTS 316
           LP    V LP + ++++P  P A A+HEF+VYRMQQYDL   P+G R+A  N E R++ +
Sbjct: 18  LPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAA 77

Query: 317 WSTSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQ 493
              SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  
Sbjct: 78  EVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAM 137

Query: 494 EINAPVYFA 520
           E   PVYFA
Sbjct: 138 ETAVPVYFA 146


>BC013283-1|AAH13283.2|  563|Homo sapiens nicalin homolog
           (zebrafish) protein.
          Length = 563

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +2

Query: 143 LPFYLFVALP-IFIIMSPVNPVA-ASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTS 316
           LP    V LP + ++++P  P A A+HEF+VYRMQQYDL   P+G R+A  N E R++ +
Sbjct: 18  LPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAA 77

Query: 317 WSTSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQ 493
              SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  
Sbjct: 78  EVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAM 137

Query: 494 EINAPVYFA 520
           E   PVYFA
Sbjct: 138 ETAVPVYFA 146


>BC010064-1|AAH10064.2|  563|Homo sapiens nicalin homolog
           (zebrafish) protein.
          Length = 563

 Score = 95.1 bits (226), Expect = 2e-19
 Identities = 50/129 (38%), Positives = 77/129 (59%), Gaps = 3/129 (2%)
 Frame = +2

Query: 143 LPFYLFVALP-IFIIMSPVNPVA-ASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTS 316
           LP    V LP + ++++P  P A A+HEF+VYRMQQYDL   P+G R+A  N E R++ +
Sbjct: 18  LPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAA 77

Query: 317 WSTSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQ 493
              SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  
Sbjct: 78  EVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAM 137

Query: 494 EINAPVYFA 520
           E   PVYFA
Sbjct: 138 ETAVPVYFA 146


>CR533566-1|CAG38597.1|  552|Homo sapiens LOC56926 protein.
          Length = 552

 Score = 94.3 bits (224), Expect = 3e-19
 Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
 Frame = +2

Query: 143 LPFYLFVALPIFIIMSPVNPVAASHEFSVYRMQQYDLHTVPHGCRSASFNLEGRSLTSWS 322
           L F +F+   + ++  P+    A+HEF+VYRMQQYDL   P+G R+A  N E R++ +  
Sbjct: 9   LGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYDLQGQPYGTRNAVLNTEARTMAAEV 68

Query: 323 TSRHCVVARVQDITLEQFLE-IRNKAGALLLVLPKNETLLTPEEREHIQLLEMAMVQQEI 499
            SR CV+ R+ D + EQ+ + +R  AGA++++LP+    +  +       +E  M+  E 
Sbjct: 69  LSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILPRAMAAVPQDVVRQFMEIEPEMLAMET 128

Query: 500 NAPVYFA 520
             PVYFA
Sbjct: 129 AVPVYFA 135


>AL731721-1|CAI14547.1|  235|Homo sapiens nudix (nucleoside
           diphosphate linked moiety X)-type motif 13 protein.
          Length = 235

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 414 YYLKMKLF*RLKKESIFNCWKWRWYNKRSMHP 509
           YY ++K++ R   E +   W WRW    +MHP
Sbjct: 194 YYPQVKVWKRPSAEKLQKRWDWRWKACSTMHP 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,646,262
Number of Sequences: 237096
Number of extensions: 1759673
Number of successful extensions: 4086
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4080
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6042162242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)