Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12b10f
(582 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113380-1|AAM29385.1| 561|Drosophila melanogaster RE02878p pro... 130 1e-30
AE014134-1833|AAF52909.2| 561|Drosophila melanogaster CG4972-PA... 130 1e-30
BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p pro... 31 1.5
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 31 1.5
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC... 31 1.5
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB... 31 1.5
X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein. 29 4.6
L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protei... 29 4.6
BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p pro... 29 4.6
BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p pro... 29 4.6
BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p pro... 29 4.6
AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,... 29 4.6
AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,... 29 4.6
AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,... 29 4.6
AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,... 29 4.6
AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,... 29 4.6
BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p pro... 29 6.1
BT001702-1|AAN71457.1| 674|Drosophila melanogaster RE63596p pro... 29 6.1
AY119043-1|AAM50903.1| 489|Drosophila melanogaster LP06502p pro... 29 6.1
AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA... 29 6.1
AE013599-3060|AAM68397.1| 650|Drosophila melanogaster CG9025-PB... 29 6.1
AE013599-3059|AAF57431.2| 702|Drosophila melanogaster CG9025-PA... 29 6.1
AY075476-1|AAL68288.1| 115|Drosophila melanogaster RE35556p pro... 28 8.0
AE014298-1824|AAF48212.1| 179|Drosophila melanogaster CG4647-PA... 28 8.0
>AY113380-1|AAM29385.1| 561|Drosophila melanogaster RE02878p
protein.
Length = 561
Score = 130 bits (314), Expect = 1e-30
Identities = 64/156 (41%), Positives = 96/156 (61%)
Frame = +2
Query: 101 LDEADGFAEIFKGYLPFYLFVALPIFIIMSPVNPVAASHEFSVYRMQQYDLHTVPHGCRS 280
++EAD EIF+G LP L + + + SPV P EF V M +YDL+ +G R
Sbjct: 2 MNEADSLTEIFRGGLPHCLLIVFSLLLTCSPVMP----SEFEVISMSKYDLNGQHYGSRV 57
Query: 281 ASFNLEGRSLTSWSTSRHCVVARVQDITLEQFLEIRNKAGALLLVLPKNETLLTPEEREH 460
AS +LE RSL SW+TSRHCV+ R+ D+++ F ++R AG L+L+LP N L PE +E
Sbjct: 58 ASISLEARSLYSWNTSRHCVLTRLTDLSIHDFDKLRQGAGGLILMLPANILNLDPETKEL 117
Query: 461 IQLLEMAMVQQEINAPVYFARWTPEMEDILADLQHS 568
I +LE +M+ P+YFA + ++E I+ D+ ++
Sbjct: 118 ITILEQSMLTHTAAVPIYFAPYNKDLEKIIDDITYT 153
>AE014134-1833|AAF52909.2| 561|Drosophila melanogaster CG4972-PA
protein.
Length = 561
Score = 130 bits (314), Expect = 1e-30
Identities = 64/156 (41%), Positives = 96/156 (61%)
Frame = +2
Query: 101 LDEADGFAEIFKGYLPFYLFVALPIFIIMSPVNPVAASHEFSVYRMQQYDLHTVPHGCRS 280
++EAD EIF+G LP L + + + SPV P EF V M +YDL+ +G R
Sbjct: 2 MNEADSLTEIFRGGLPHCLLIVFSLLLTCSPVMP----SEFEVISMSKYDLNGQHYGSRV 57
Query: 281 ASFNLEGRSLTSWSTSRHCVVARVQDITLEQFLEIRNKAGALLLVLPKNETLLTPEEREH 460
AS +LE RSL SW+TSRHCV+ R+ D+++ F ++R AG L+L+LP N L PE +E
Sbjct: 58 ASISLEARSLYSWNTSRHCVLTRLTDLSIHDFDKLRQGAGGLILMLPANILNLDPETKEL 117
Query: 461 IQLLEMAMVQQEINAPVYFARWTPEMEDILADLQHS 568
I +LE +M+ P+YFA + ++E I+ D+ ++
Sbjct: 118 ITILEQSMLTHTAAVPIYFAPYNKDLEKIIDDITYT 153
>BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p
protein.
Length = 394
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 414 YYLKMKLF*RLKKESIFN--CWKWRWYNKRSMHPFTLLV 524
YY+++ L E++F C WR Y K S+H F LL+
Sbjct: 294 YYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLL 332
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 414 YYLKMKLF*RLKKESIFN--CWKWRWYNKRSMHPFTLLV 524
YY+++ L E++F C WR Y K S+H F LL+
Sbjct: 420 YYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLL 458
>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
isoform C protein.
Length = 2148
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 414 YYLKMKLF*RLKKESIFN--CWKWRWYNKRSMHPFTLLV 524
YY+++ L E++F C WR Y K S+H F LL+
Sbjct: 658 YYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLL 696
>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
isoform B protein.
Length = 2196
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 414 YYLKMKLF*RLKKESIFN--CWKWRWYNKRSMHPFTLLV 524
YY+++ L E++F C WR Y K S+H F LL+
Sbjct: 706 YYIELVFTCLLDLETLFKIYCLGWRGYYKHSIHKFELLL 744
>X62589-1|CAA44474.1| 1533|Drosophila melanogaster pumilio protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>L07943-1|AAB59189.1| 1533|Drosophila melanogaster pumilio protein
protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>BT021317-1|AAX33465.1| 1298|Drosophila melanogaster RE10602p protein.
Length = 1298
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>BT009970-1|AAQ22439.1| 1533|Drosophila melanogaster RE63138p protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>BT001872-1|AAN71644.1| 935|Drosophila melanogaster SD07661p
protein.
Length = 935
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 646 VDPVALQFIINAFKGQVYSLSTHPYGCR 673
>AE014297-881|AAO41523.1| 935|Drosophila melanogaster CG9755-PE,
isoform E protein.
Length = 935
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 646 VDPVALQFIINAFKGQVYSLSTHPYGCR 673
>AE014297-880|AAF54338.2| 1185|Drosophila melanogaster CG9755-PB,
isoform B protein.
Length = 1185
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 896 VDPVALQFIINAFKGQVYSLSTHPYGCR 923
>AE014297-879|AAN13410.1| 1533|Drosophila melanogaster CG9755-PD,
isoform D protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>AE014297-878|AAN13409.1| 1533|Drosophila melanogaster CG9755-PC,
isoform C protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>AE014297-877|AAF54340.2| 1533|Drosophila melanogaster CG9755-PA,
isoform A protein.
Length = 1533
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 194 VNPVAASHEFSVYRMQQYDLHTVPHGCR 277
V+PVA + ++ Q Y L T P+GCR
Sbjct: 1244 VDPVALQFIINAFKGQVYSLSTHPYGCR 1271
>BT016049-1|AAV36934.1| 1105|Drosophila melanogaster LP18465p
protein.
Length = 1105
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 565 MLEVSQNVLHFRSPTSKVNGCIDLLLYHRHFQQLNMLSFFRRQKSFIF 422
++EV N L +PT KVN ID + HR F + +L FR K F
Sbjct: 544 LVEVFVNTLIIPNPTGKVN--IDHM--HRPFTEAEILHVFRTSKLTFF 587
>BT001702-1|AAN71457.1| 674|Drosophila melanogaster RE63596p
protein.
Length = 674
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 217 RIFRVQNATI*LTHSSPWLS*CQLQLRRSFFNIMEHITSLC 339
+I RV+N + L H P L+ CQ ++ + F I E + C
Sbjct: 422 QILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPNAC 462
>AY119043-1|AAM50903.1| 489|Drosophila melanogaster LP06502p
protein.
Length = 489
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 217 RIFRVQNATI*LTHSSPWLS*CQLQLRRSFFNIMEHITSLC 339
+I RV+N + L H P L+ CQ ++ + F I E + C
Sbjct: 237 QILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPNAC 277
>AE014298-2595|AAF48750.2| 1105|Drosophila melanogaster CG8211-PA
protein.
Length = 1105
Score = 28.7 bits (61), Expect = 6.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3
Query: 565 MLEVSQNVLHFRSPTSKVNGCIDLLLYHRHFQQLNMLSFFRRQKSFIF 422
++EV N L +PT KVN ID + HR F + +L FR K F
Sbjct: 544 LVEVFVNTLIIPNPTGKVN--IDHM--HRPFTEAEILHVFRTSKLTFF 587
>AE013599-3060|AAM68397.1| 650|Drosophila melanogaster CG9025-PB,
isoform B protein.
Length = 650
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 217 RIFRVQNATI*LTHSSPWLS*CQLQLRRSFFNIMEHITSLC 339
+I RV+N + L H P L+ CQ ++ + F I E + C
Sbjct: 398 QILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPNAC 438
>AE013599-3059|AAF57431.2| 702|Drosophila melanogaster CG9025-PA,
isoform A protein.
Length = 702
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 217 RIFRVQNATI*LTHSSPWLS*CQLQLRRSFFNIMEHITSLC 339
+I RV+N + L H P L+ CQ ++ + F I E + C
Sbjct: 450 QILRVENHNLTLDHVLPVLAKCQQEIENNKFKIKEAKPNAC 490
>AY075476-1|AAL68288.1| 115|Drosophila melanogaster RE35556p
protein.
Length = 115
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 419 PKNETLLTPEEREHIQ-LLEMAMVQQEINAPVYFARWTPEMED 544
P+ E + P E ++ LL V Q + P Y + W P+ ED
Sbjct: 47 PEVEVVANPPEWRFVERLLPAKTVPQPVEKPKYPSGWQPQKED 89
>AE014298-1824|AAF48212.1| 179|Drosophila melanogaster CG4647-PA
protein.
Length = 179
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 419 PKNETLLTPEEREHIQ-LLEMAMVQQEINAPVYFARWTPEMED 544
P+ E + P E ++ LL V Q + P Y + W P+ ED
Sbjct: 47 PEVEVVANPPEWRFVERLLPAKTVPQPVEKPKYPSGWQPQKED 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,756,589
Number of Sequences: 53049
Number of extensions: 575089
Number of successful extensions: 1524
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1522
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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