Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b09r
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical ...   128   3e-30
Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical pr...   124   5e-29
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    29   3.7  
U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine rece...    28   6.5  
AL032639-7|CAA21631.2|  465|Caenorhabditis elegans Hypothetical ...    28   6.5  
Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z66519-13|CAI46547.1|  281|Caenorhabditis elegans Hypothetical p...    27   8.6  
Z66519-12|CAA91376.2|  288|Caenorhabditis elegans Hypothetical p...    27   8.6  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF038611-8|AAB92035.1|  111|Caenorhabditis elegans Hypothetical
           protein E04A4.7 protein.
          Length = 111

 Score =  128 bits (310), Expect = 3e-30
 Identities = 58/88 (65%), Positives = 67/88 (76%)
 Frame = -2

Query: 641 QRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITWNDDTLFEYLENP 462
           QRC QCH V++    K GP LHG  GR +G  +GF YS ANK KG+ W  +TLFEYL NP
Sbjct: 18  QRCLQCHVVDSTAT-KTGPTLHGVIGRTSGTVSGFDYSAANKNKGVVWTRETLFEYLLNP 76

Query: 461 KKYIPGTKMVFAGLKKANERADLIAYLK 378
           KKYIPGTKMVFAGLKKA+ERADLI Y++
Sbjct: 77  KKYIPGTKMVFAGLKKADERADLIKYIE 104


>Z74046-2|CAA98555.1|  123|Caenorhabditis elegans Hypothetical
           protein ZC116.2 protein.
          Length = 123

 Score =  124 bits (299), Expect = 5e-29
 Identities = 56/88 (63%), Positives = 69/88 (78%)
 Frame = -2

Query: 641 QRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITWNDDTLFEYLENP 462
           QRC QCH V +  + K GP L+G  GR++GQ AGF YS ANK KG+ W+  TLF+YL +P
Sbjct: 28  QRCEQCHVVNSL-QTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGVVWDRQTLFDYLADP 86

Query: 461 KKYIPGTKMVFAGLKKANERADLIAYLK 378
           KKYIPGTKMVFAGLKKA+ERADLI +++
Sbjct: 87  KKYIPGTKMVFAGLKKADERADLIKFIE 114


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -2

Query: 569 FGRKTGQAAGFSYSDANK---AKGITWNDDTLFEYLEN--PKKYIPGTK 438
           FG++ G A GF  +  NK    K    ND  L  +L N   KKY   TK
Sbjct: 569 FGKRNGNAYGFEMASINKLADVKNALRNDRNLLHFLVNFIEKKYPDLTK 617


>U23521-5|AAC46813.2|  250|Caenorhabditis elegans Hypothetical
           protein F41C3.6 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 403 VLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFL 299
           +L  LP  N      + ++N ++SI HNI   YFL
Sbjct: 10  LLLFLPQENRYFVELRSLKNLLKSILHNIENDYFL 44


>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 312 PEMLWKMLLM-EFSITLKLLGSRFEIGNKVSTLICLLESSKYHLGSRDVFLGILKIFKE 485
           PEM WK     +  I+  + GS FE+  K   L     SS   L S+  ++ ++ IFK+
Sbjct: 805 PEMAWKNFASPQDEISFLVEGSTFEMPEKYIQLYRGNSSSLIVLDSKMHYIRVINIFKK 863


>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = +3

Query: 312 PEMLWKMLLM-EFSITLKLLGSRFEIGNKVSTLICLLESSKYHLGSRDVFLGILKIFKE 485
           PEM WK     +  I+  + GS FE+  K   L     SS   L S+  ++ ++ IFK+
Sbjct: 805 PEMAWKNFASPQDEISFLVEGSTFEMPEKYIQLYRGNSSSLIVLDSKMHYIRVINIFKK 863


>U41996-1|AAA83471.2|  306|Caenorhabditis elegans Serpentine
           receptor, class sx protein22 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 208 QSFAVVVCEYICTWYIMYCVIY 143
           +S  VV+  Y+CTW++   VI+
Sbjct: 210 KSMIVVISLYVCTWFLALLVIF 231


>AL032639-7|CAA21631.2|  465|Caenorhabditis elegans Hypothetical
           protein Y38F1A.6 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +1

Query: 412 AFLSPANTILVPG--MYFLGFSRYSKRVSSFHVMPLALLASEYENPAAWPVFRPKNP 576
           A + P N + +P     + GF      + SF  +P    +   ENP   P+++  NP
Sbjct: 218 AVVDPLNVMSMPRNVAIYSGFDVLCHALESFTALPFDQRSPRPENPGVRPLYQGSNP 274


>Z99281-52|CAB16507.3|  512|Caenorhabditis elegans Hypothetical
           protein Y57G11C.5 protein.
          Length = 512

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 604 PPASTVWHWAH 636
           PP +++WHWAH
Sbjct: 310 PPMASLWHWAH 320


>Z66519-13|CAI46547.1|  281|Caenorhabditis elegans Hypothetical
           protein B0334.2b protein.
          Length = 281

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 400 LTLLPISNLLPSNFKVIENSIRSIFHNISGI 308
           +T+  I++L+   F    + +RSI H+I+GI
Sbjct: 230 ITVSEITSLVAKEFHASPHQVRSILHDINGI 260


>Z66519-12|CAA91376.2|  288|Caenorhabditis elegans Hypothetical
           protein B0334.2a protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 400 LTLLPISNLLPSNFKVIENSIRSIFHNISGI 308
           +T+  I++L+   F    + +RSI H+I+GI
Sbjct: 237 ITVSEITSLVAKEFHASPHQVRSILHDINGI 267


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 551  QAAGFSYSDANKAKGITWNDD 489
            +  GFSY D N     TW+DD
Sbjct: 1763 RGVGFSYQDKNVNNDTTWDDD 1783


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,762,665
Number of Sequences: 27780
Number of extensions: 308488
Number of successful extensions: 882
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)