Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b09f
         (590 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X01760-1|CAA25900.1|  108|Drosophila melanogaster protein ( Dros...   217   1e-56
M11381-1|AAA28437.1|  108|Drosophila melanogaster protein ( D.me...   217   1e-56
AY071701-1|AAL49323.1|  108|Drosophila melanogaster RH17228p pro...   217   1e-56
AE014134-2753|AAF53554.1|  108|Drosophila melanogaster CG17903-P...   217   1e-56
X01761-1|CAA25901.1|  105|Drosophila melanogaster protein ( Dros...   169   2e-42
BT006002-1|AAO67367.1|  105|Drosophila melanogaster LP05614p pro...   169   2e-42
AE014134-2752|AAF53553.1|  105|Drosophila melanogaster CG13263-P...   169   2e-42
AY052113-1|AAK93537.1|  689|Drosophila melanogaster SD06390p pro...    29   6.2  
AE014134-1735|AAO41181.1|  689|Drosophila melanogaster CG5853-PA...    29   6.2  

>X01760-1|CAA25900.1|  108|Drosophila melanogaster protein (
           Drosophila melanogastercytochrome c gene DC4. ).
          Length = 108

 Score =  217 bits (529), Expect = 1e-56
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +3

Query: 114 MGVPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAK 293
           MGVPAG+ E GKK+FVQRCAQCHTVEAGGKHKVGPNLHG  GRKTGQAAGF+Y+DANKAK
Sbjct: 1   MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAK 60

Query: 294 GITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKSATK 437
           GITWN+DTLFEYLENPKKYIPGTKM+FAGLKK NER DLIAYLKSATK
Sbjct: 61  GITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSATK 108


>M11381-1|AAA28437.1|  108|Drosophila melanogaster protein (
           D.melanogaster cytochromeC gene. ).
          Length = 108

 Score =  217 bits (529), Expect = 1e-56
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +3

Query: 114 MGVPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAK 293
           MGVPAG+ E GKK+FVQRCAQCHTVEAGGKHKVGPNLHG  GRKTGQAAGF+Y+DANKAK
Sbjct: 1   MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAK 60

Query: 294 GITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKSATK 437
           GITWN+DTLFEYLENPKKYIPGTKM+FAGLKK NER DLIAYLKSATK
Sbjct: 61  GITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSATK 108


>AY071701-1|AAL49323.1|  108|Drosophila melanogaster RH17228p
           protein.
          Length = 108

 Score =  217 bits (529), Expect = 1e-56
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +3

Query: 114 MGVPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAK 293
           MGVPAG+ E GKK+FVQRCAQCHTVEAGGKHKVGPNLHG  GRKTGQAAGF+Y+DANKAK
Sbjct: 1   MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAK 60

Query: 294 GITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKSATK 437
           GITWN+DTLFEYLENPKKYIPGTKM+FAGLKK NER DLIAYLKSATK
Sbjct: 61  GITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSATK 108


>AE014134-2753|AAF53554.1|  108|Drosophila melanogaster CG17903-PA
           protein.
          Length = 108

 Score =  217 bits (529), Expect = 1e-56
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +3

Query: 114 MGVPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAK 293
           MGVPAG+ E GKK+FVQRCAQCHTVEAGGKHKVGPNLHG  GRKTGQAAGF+Y+DANKAK
Sbjct: 1   MGVPAGDVEKGKKLFVQRCAQCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAK 60

Query: 294 GITWNDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKSATK 437
           GITWN+DTLFEYLENPKKYIPGTKM+FAGLKK NER DLIAYLKSATK
Sbjct: 61  GITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSATK 108


>X01761-1|CAA25901.1|  105|Drosophila melanogaster protein (
           Drosophila melanogastercytochrome c gene DC3. ).
          Length = 105

 Score =  169 bits (412), Expect = 2e-42
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = +3

Query: 126 AGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 305
           +G+AENGKKIFVQ+CAQCHT E GGKHKVGPNL G  GRK G AAG+ Y+DAN  KG+TW
Sbjct: 3   SGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTW 62

Query: 306 NDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKS 428
            +  L EYL++PKKYIPGTKMVFAGLKKA ERADLIA+LKS
Sbjct: 63  TEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAFLKS 103


>BT006002-1|AAO67367.1|  105|Drosophila melanogaster LP05614p
           protein.
          Length = 105

 Score =  169 bits (412), Expect = 2e-42
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = +3

Query: 126 AGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 305
           +G+AENGKKIFVQ+CAQCHT E GGKHKVGPNL G  GRK G AAG+ Y+DAN  KG+TW
Sbjct: 3   SGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTW 62

Query: 306 NDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKS 428
            +  L EYL++PKKYIPGTKMVFAGLKKA ERADLIA+LKS
Sbjct: 63  TEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAFLKS 103


>AE014134-2752|AAF53553.1|  105|Drosophila melanogaster CG13263-PA
           protein.
          Length = 105

 Score =  169 bits (412), Expect = 2e-42
 Identities = 76/101 (75%), Positives = 86/101 (85%)
 Frame = +3

Query: 126 AGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGITW 305
           +G+AENGKKIFVQ+CAQCHT E GGKHKVGPNL G  GRK G AAG+ Y+DAN  KG+TW
Sbjct: 3   SGDAENGKKIFVQKCAQCHTYEVGGKHKVGPNLGGVVGRKCGTAAGYKYTDANIKKGVTW 62

Query: 306 NDDTLFEYLENPKKYIPGTKMVFAGLKKANERADLIAYLKS 428
            +  L EYL++PKKYIPGTKMVFAGLKKA ERADLIA+LKS
Sbjct: 63  TEGNLDEYLKDPKKYIPGTKMVFAGLKKAEERADLIAFLKS 103


>AY052113-1|AAK93537.1|  689|Drosophila melanogaster SD06390p
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = +1

Query: 301 HGMTTLSLNILRIPRNTSL-----EPRWYLLDSRRQMSVLTLLPISNLLPSNFKVI 453
           H MTT+ L +L  P + S+       RWY L +      L  LPIS +    F VI
Sbjct: 477 HSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVI 532


>AE014134-1735|AAO41181.1|  689|Drosophila melanogaster CG5853-PA
           protein.
          Length = 689

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = +1

Query: 301 HGMTTLSLNILRIPRNTSL-----EPRWYLLDSRRQMSVLTLLPISNLLPSNFKVI 453
           H MTT+ L +L  P + S+       RWY L +      L  LPIS +    F VI
Sbjct: 477 HSMTTMMLTVLTFPMDISILIKEHFNRWYSLKAYYTAMTLVDLPISIISCFFFTVI 532


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,573,514
Number of Sequences: 53049
Number of extensions: 584374
Number of successful extensions: 1313
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)