Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b03r
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.1  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.4  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.2  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 352 VERSKGGGFVLFKFYFLIHILLLHTYYCG 266
           ++ S GGGF       LI   L    YCG
Sbjct: 661 IDHSYGGGFGFGSAVLLISDRLSRDLYCG 689


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -1

Query: 352 VERSKGGGFVLFKFYFLIHILLLHTYYCG 266
           ++ S GGGF       LI   L    YCG
Sbjct: 699 IDHSYGGGFGFGSAVLLISDRLSRDLYCG 727


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 378 VASYNQLTKFRANTYVD*FQCNTIHTLVNILYIYFKNNSTYIIICN 515
           +A ++  T+   NT++   + NT     N L I    N+ Y++  N
Sbjct: 321 IACWDTNTELNPNTFILVAENNTTMVFCNDLSIDRSTNTMYVLSDN 366


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 316 KFYFLIHILLLHTYY 272
           +FYF +H  +L+ YY
Sbjct: 256 EFYFFLHKQVLNRYY 270


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 316 KFYFLIHILLLHTYY 272
           +FYF +H  +L+ YY
Sbjct: 256 EFYFFLHKQVLNRYY 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,240
Number of Sequences: 438
Number of extensions: 4094
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)