Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b02r
         (747 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CDD80 Cluster: hypothetical protein TTHERM_0029...    33   5.6  
UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_UPI00006CDD80 Cluster: hypothetical protein
           TTHERM_00294740; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00294740 - Tetrahymena
           thermophila SB210
          Length = 991

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 145 ISNRTVQLVYFCTKIVTTLFKNFTT*FSILKAKIVNRNNY 26
           + +R  +L+Y C K + T  KN T  F +LK++ +  N+Y
Sbjct: 695 LQSRDSELIYMCLKEMDTYMKNETLKFHVLKSEQIYANHY 734


>UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4638

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = +3

Query: 144  INNLQNLTIIDSNVGVANHC-----FNLT*FKTSSCYVPLYECLMYNN*DVDYSHALQRA 308
            +NN++N+ II+  + + +H        L  F     Y+ LYE  +YNN    Y H    +
Sbjct: 1520 LNNIKNINIINEQINILSHIKMFSRIMLFLFFVKKKYIILYEQCLYNNLHFLYEHHFYPS 1579

Query: 309  F 311
            F
Sbjct: 1580 F 1580


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,873,858
Number of Sequences: 1657284
Number of extensions: 11259435
Number of successful extensions: 23830
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23819
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)