Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b02f
         (619 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.3  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/45 (20%), Positives = 20/45 (44%)
 Frame = +3

Query: 330 TPVQNCSTAGTAPRVQTTINAATIEKTIAQCRYWVLSAIATSSVI 464
           TP +N   A     +   ++    E   AQ +YW+ +   ++ ++
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENIDAQVKYWMSNGAPSAKIV 294


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +3

Query: 420 CRYWVLSAIATSSVITQDTTMTAV---PITRKYA 512
           C YW+L  +A  S   Q    TA     I  KYA
Sbjct: 327 CFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYA 360


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = +3

Query: 420 CRYWVLSAIATSSVITQDTTMTAV---PITRKYA 512
           C YW+L  +A  S   Q    TA     I  KYA
Sbjct: 283 CFYWLLVMVAMFSRTQQSANKTATFVHEIWNKYA 316


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 360 YRPLSNSGPEYAKQDDSNGRTKTT 289
           Y P  N+ PE     + NG+ +TT
Sbjct: 382 YIPCWNATPEIITYLEKNGKPRTT 405


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,786
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)