Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12b02f
         (619 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    27   0.48 
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    26   1.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.5  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 346 AQRPVLRRASRRQ*MLLQSKRRLLSADIGYSLLLRRV 456
           AQRP++ +      M L+  ++LL+    Y  LLRRV
Sbjct: 340 AQRPMVIKVGNVYPMTLEMFQKLLNVSYSYFTLLRRV 376


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +2

Query: 485 CCPDYKKVCSPPQITSVSCEYEQQTYAPDDQVN-KGCN 595
           CCP  +++ SPP   S+      Q+    ++++ K CN
Sbjct: 60  CCPQSQQLDSPPSGFSIPTPLNSQSRGGSERISEKKCN 97


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 534 YRANTSNRLMHRTIKLTKAAICV 602
           YR    NR++H  +K+TK  + V
Sbjct: 305 YRTAGENRMLHSQMKVTKMLLIV 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,173
Number of Sequences: 2352
Number of extensions: 13782
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)