Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a24r
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.31
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 24 1.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.8
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.8
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.8
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.31
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = -1
Query: 712 QDLEEKLYNSILTGXYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 542
++ E+++ ++IL G YD+ +R S E + G + N+ I TMEY +L
Sbjct: 29 REKEKEVLDNIL-GGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQL 84
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.8 bits (49), Expect = 1.7
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -1
Query: 712 QDLEEKLYNSILTGXYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 542
++ E+++ ++IL G YD+ +R S E + G + N+ I MEY +L
Sbjct: 29 REKEKEVLDNIL-GGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQL 84
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 328 ENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
E NR Y K+HN K + L T+ N SR R
Sbjct: 14 EKNRRYEKLHNEK--EKLLEERTSRNRYSRSR 43
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 331 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -1
Query: 331 WENNRVYFKIHNTKYNQYLKMSTTTCNCNSRDR 233
+ +R Y K+HN K + + N SR+R
Sbjct: 12 YRKDRRYEKLHNEKEKLLEERTNRKRNSRSRER 44
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +3
Query: 6 LERCNEPRVDVRKTGDFTIVVPTAL 80
L N P K GD+T ++P L
Sbjct: 16 LNATNSPHTCRTKNGDYTKIMPDIL 40
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,566
Number of Sequences: 438
Number of extensions: 4448
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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