Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a24f
(562 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 3.3
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 28 7.5
BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p pro... 28 7.5
AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA... 28 7.5
BT024417-1|ABC86479.1| 483|Drosophila melanogaster IP03130p pro... 28 9.9
AY095514-1|AAM12248.1| 274|Drosophila melanogaster GH01508p pro... 28 9.9
AY071309-1|AAL48931.1| 316|Drosophila melanogaster RE33721p pro... 28 9.9
AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p pro... 28 9.9
AE014297-1568|AAF54850.3| 478|Drosophila melanogaster CG6802-PA... 28 9.9
AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA... 28 9.9
AE014296-1050|AAF50713.1| 274|Drosophila melanogaster CG6483-PA... 28 9.9
AE014134-2459|AAF53372.1| 377|Drosophila melanogaster CG16876-P... 28 9.9
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 69 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 182
+CSP + ++ T T+TS N T SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +2
Query: 365 YVKIIY--RNYNLALKLGSTTNPSNERI 442
Y+KI+Y R+Y L GST N NE I
Sbjct: 15 YIKIVYKGRSYKCLLDTGSTINMINENI 42
>BT010284-1|AAQ23602.1| 2727|Drosophila melanogaster LP05936p
protein.
Length = 2727
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 454 WCRQAY*TRQLEVHYLVGEQQSVLQD 531
W Q+ T QL++H G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835
>AE014134-1818|AAF52899.1| 2727|Drosophila melanogaster CG5604-PA
protein.
Length = 2727
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 454 WCRQAY*TRQLEVHYLVGEQQSVLQD 531
W Q+ T QL++H G Q +VLQD
Sbjct: 810 WVLQSQKTNQLQIHNTEGHQVTVLQD 835
>BT024417-1|ABC86479.1| 483|Drosophila melanogaster IP03130p
protein.
Length = 483
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 313 FLSVADPQLVAVLHGVPSLVNDQVVNYILDDG 218
F+ V+DPQ+V + P VN ++ +DDG
Sbjct: 100 FMIVSDPQVVQDIFTSPHCVNKGIIYKAVDDG 131
>AY095514-1|AAM12248.1| 274|Drosophila melanogaster GH01508p
protein.
Length = 274
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 41 MKLLVVFAMCMLAASAGVVELSADTSNQDL 130
MK+LVVFA+ + ASAG++ +DL
Sbjct: 1 MKVLVVFALALATASAGLLPQQVPIHPRDL 30
>AY071309-1|AAL48931.1| 316|Drosophila melanogaster RE33721p
protein.
Length = 316
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 145 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 237
+Q HR +R+CCP L + GL P CS
Sbjct: 67 EQVTHRLVRECCPGYLQV---ESGLCEPICS 94
>AY058442-1|AAL13671.1| 463|Drosophila melanogaster GH22459p
protein.
Length = 463
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 428 SNERIAYGDGVDKHTELVSWKFITLWENNRVYFKI 532
+NE Y + V++ T L+SW+F++++ + F +
Sbjct: 150 ANESTPYAEAVNECTALLSWRFMSVYLQVELLFTL 184
>AE014297-1568|AAF54850.3| 478|Drosophila melanogaster CG6802-PA
protein.
Length = 478
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 313 FLSVADPQLVAVLHGVPSLVNDQVVNYILDDG 218
F+ V+DPQ+V + P VN ++ +DDG
Sbjct: 77 FMIVSDPQVVQDIFTSPHCVNKGIIYKAVDDG 108
>AE014296-1274|AAF50549.2| 463|Drosophila melanogaster CG4321-PA
protein.
Length = 463
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +2
Query: 428 SNERIAYGDGVDKHTELVSWKFITLWENNRVYFKI 532
+NE Y + V++ T L+SW+F++++ + F +
Sbjct: 150 ANESTPYAEAVNECTALLSWRFMSVYLQVELLFTL 184
>AE014296-1050|AAF50713.1| 274|Drosophila melanogaster CG6483-PA
protein.
Length = 274
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 41 MKLLVVFAMCMLAASAGVVELSADTSNQDL 130
MK+LVVFA+ + ASAG++ +DL
Sbjct: 1 MKVLVVFALALATASAGLLPQQVPIHPRDL 30
>AE014134-2459|AAF53372.1| 377|Drosophila melanogaster CG16876-PA
protein.
Length = 377
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 145 QQHPHRRLRQCCPSELGI*EPRQGLHHPECS 237
+Q HR +R+CCP L + GL P CS
Sbjct: 67 EQVTHRLVRECCPGYLQV---ESGLCEPICS 94
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,584,511
Number of Sequences: 53049
Number of extensions: 552694
Number of successful extensions: 1623
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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