Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a21f
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   3.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   4.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.9  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = -3

Query: 538 QTTMATENLLINYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYASTLMIASE*EEI 359
           +TT+  ENLL +Y  +    +A  E L        F   +K +  V     M   + +EI
Sbjct: 106 KTTLTIENLLADYDFSETLTRAKFEELNN----DQFLKTLKPVKKVLEDADMTKDQIDEI 161

Query: 358 LRV 350
           + V
Sbjct: 162 VLV 164


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 561 NRSEE*CDPLMFQIQDCFVTCCG 629
           NR+ + CDP    + DCF +  G
Sbjct: 157 NRAPD-CDPTQCVLPDCFCSADG 178


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 389 CASINRIYGF 418
           C S+NRI+GF
Sbjct: 527 CDSVNRIFGF 536


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = -3

Query: 517 NLLINYSSNWQAVKAIRESLPQFYIVSAFALVIKTINAVYAS 392
           NLL +Y S     K IR S      V+        +N VY+S
Sbjct: 129 NLLKHYQSTTDLHKKIRYSAFGMIFVALLEHCFSMLNYVYSS 170


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +3

Query: 579 CDPLMFQIQDCFVTCCG 629
           CDP    + DCF +  G
Sbjct: 155 CDPTQCVLPDCFCSADG 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,353
Number of Sequences: 336
Number of extensions: 4211
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)