Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a21f
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    27   0.66 
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   8.1  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 206 VYHHKF*VVPPTPVIWAAAGIFLWTL 129
           VY  K  V PPT ++    G  +WTL
Sbjct: 310 VYKTKMRVYPPTKIVTPYGGRLIWTL 335


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 224 NLCTDHVYHHKF*VVPPTPVIWAAAGIFLWTLC 126
           N+ TD  + +K+ +V   P+++       WTLC
Sbjct: 177 NMWTD--FQYKYLIVTGKPIVFPKLYPITWTLC 207


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 97  NVGGRGTWALHKVQRNIPAAAHITGVGGTTQN 192
           N G    W    +QR IP   + TG  GTT +
Sbjct: 330 NNGSHNAWGGF-IQRAIPLPLNPTGAAGTTNS 360


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 206 HGQYTDLLRLFENGGFPPEANYLFLGDYVDRGKQSLETI 322
           H      +RLFE      EAN+  L D     K++L  +
Sbjct: 729 HDLLEQRIRLFEERNNDREANFRLLEDAYQSAKKTLANV 767


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 555 PCKSGDKPPWQQKIFSSIIA 496
           PC   +KP W +++ + I A
Sbjct: 297 PCSKAEKPAWMRRLENRINA 316


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,971
Number of Sequences: 2352
Number of extensions: 16632
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)