Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a17r
(434 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 219 3e-56
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 200 8e-51
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 192 3e-48
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 186 1e-46
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 185 4e-46
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 183 1e-45
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 116 3e-25
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 111 6e-24
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 110 1e-23
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 109 2e-23
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 101 5e-21
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 99 4e-20
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 98 6e-20
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 94 1e-18
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 2e-17
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 89 5e-17
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 72 5e-12
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 48 9e-05
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 38 0.070
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 37 0.16
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 36 0.37
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.65
UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellula... 35 0.86
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 34 1.5
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.6
UniRef50_Q22ZD3 Cluster: Putative uncharacterized protein; n=2; ... 33 2.6
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 33 3.5
UniRef50_A2QSW7 Cluster: Contig An08c0340, complete genome; n=2;... 33 3.5
UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68; Bacteri... 33 3.5
UniRef50_Q749V8 Cluster: Putative uncharacterized protein; n=4; ... 32 4.6
UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1; Os... 32 6.0
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 219 bits (534), Expect = 3e-56
Identities = 104/120 (86%), Positives = 113/120 (94%), Gaps = 2/120 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKH 24
IVVNLTG LNKCGVISPRFDV + D+E+W NLLPSRQFG++VLTTS IMDHEEARRKH
Sbjct: 61 IVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKH 120
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 200 bits (489), Expect = 8e-51
Identities = 97/120 (80%), Positives = 107/120 (89%), Gaps = 2/120 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKH 24
IVVNLTG LNKCGVIS RFDV + D+++W NLLP RQFG++VLTT I+DHEEARRKH
Sbjct: 184 IVVNLTGRLNKCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKH 243
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 192 bits (468), Expect = 3e-48
Identities = 93/124 (75%), Positives = 107/124 (86%), Gaps = 2/124 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGAIMDHEEARRKH 24
IVV L G LNKCGVISPRFDV + +IE WT LLPSRQFG++VLTTS IMDHEEARRK+
Sbjct: 61 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
Query: 23 LEEK 12
+ K
Sbjct: 121 VGGK 124
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 186 bits (454), Expect = 1e-46
Identities = 91/119 (76%), Positives = 102/119 (85%), Gaps = 2/119 (1%)
Frame = -1
Query: 356 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG 177
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 176 -LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKHLEEKFR 6
LNKCGVI+ RFDV D+E+W NL PS QFG++VLTTS IMDHEEAR+KH + R
Sbjct: 234 RLNKCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSRAR 292
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 185 bits (450), Expect = 4e-46
Identities = 89/122 (72%), Positives = 102/122 (83%), Gaps = 2/122 (1%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 203 GKIVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARR 30
GK+VVNLTG LNKCGVISPRFDV + D+E+W NLLP+RQFG++VLTT IMD EE R+
Sbjct: 157 GKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
Query: 29 KH 24
KH
Sbjct: 217 KH 218
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 183 bits (446), Expect = 1e-45
Identities = 89/120 (74%), Positives = 103/120 (85%), Gaps = 2/120 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKH 24
+VV LT LNKCGVISPRF V + D+E+W NLLPS QFG+++LTTS I D EEARRKH
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKH 119
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 116 bits (278), Expect = 3e-25
Identities = 57/119 (47%), Positives = 81/119 (68%), Gaps = 2/119 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRK 27
V L G +NK G I PRF V +++ E+W LP+ +FG L+++TS +M H+EA K
Sbjct: 61 YRVQLLGRINKAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEK 119
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 111 bits (267), Expect = 6e-24
Identities = 53/116 (45%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Frame = -1
Query: 362 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNL 183
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 182 TG-LNKCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGAIMDHEEARRKHL 21
G +N C ++ R DV +IE++T LP+RQ+GY+V+TT I+DHEEA ++++
Sbjct: 65 QGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 110 bits (265), Expect = 1e-23
Identities = 57/121 (47%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKH 24
V L G +NKCG I PR+ V ERW LP++ FG L+LTTS +M EAR K
Sbjct: 61 YSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKK 120
Query: 23 L 21
+
Sbjct: 121 I 121
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 109 bits (262), Expect = 2e-23
Identities = 54/124 (43%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERWTN----LLPSRQFGYLVLTTSGAIMDHEEAR 33
I+V L G +NKCG ISPR+ + N + R + LPS++ G ++++T +M H +
Sbjct: 61 IIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGI 120
Query: 32 RKHL 21
R+ +
Sbjct: 121 REKI 124
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 101 bits (243), Expect = 5e-21
Identities = 50/118 (42%), Positives = 80/118 (67%), Gaps = 2/118 (1%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 179 G-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKHLEEK 12
G LN+CG ISP + V + IE + T LLP+RQFG+++ TS I+DH+E +++ K
Sbjct: 65 GRLNRCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGK 122
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 99.1 bits (236), Expect = 4e-20
Identities = 48/118 (40%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Frame = -1
Query: 368 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 189
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 188 NLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKHL 21
L+G +N CG I PRF + + E + LP+R FG L+++T+ +M ++AR++ L
Sbjct: 63 ELSGNINDCGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRL 120
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 98.3 bits (234), Expect = 6e-20
Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
L+D + +I NA + GK +V+I P S +I + L VM + YI FE++++ R GK V L+
Sbjct: 6 LNDVINTIKNASRIGKSEVIIGPASVMIGRILKVMQDYNYIKSFEVIEEERGGKFRVELS 65
Query: 179 G-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARR 30
+N CGVI PR V ++IER+ + LP++ FG ++LTT+ IM H EAR+
Sbjct: 66 DTINNCGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 93.9 bits (223), Expect = 1e-18
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 2/121 (1%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 203 GKIVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARR 30
GK V L G +N+CG + PR+ ++ E+W LP+R +G L++TTS +M H EAR
Sbjct: 76 GKFEVELKGAINECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEARE 135
Query: 29 K 27
+
Sbjct: 136 E 136
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 2e-17
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -1
Query: 383 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 246
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 53.6 bits (123), Expect(2) = 2e-17
Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = -1
Query: 245 GYIGEFEIVDDHRAGKIVVNLTG-LNKCGVI 156
GYI EFE +DDHRAGKIVV L G +NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 88.6 bits (210), Expect = 5e-17
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 197 IVVNLTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRK 27
V+L + KCG ISPRF V + W LPS G LV+TT+ +M H EA +
Sbjct: 61 FSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAER 119
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 72.1 bits (169), Expect = 5e-12
Identities = 34/117 (29%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Frame = -1
Query: 365 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVN 186
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 185 LTG-LNKCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGAIMDHEEARRKHL 21
L+ N+ I PRF V +++E++ LP+ FG L+L+TS ++ + EA+ + +
Sbjct: 64 LSEYFNEANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKI 120
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 48.0 bits (109), Expect = 9e-05
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Frame = -1
Query: 269 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTG-LNKCGVISPRFDVPINDIER 117
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 38.3 bits (85), Expect = 0.070
Identities = 15/20 (75%), Positives = 19/20 (95%)
Frame = -1
Query: 239 IGEFEIVDDHRAGKIVVNLT 180
IG+FE++DDHRAGKIV NL+
Sbjct: 9 IGKFEVIDDHRAGKIVENLS 28
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 37.1 bits (82), Expect = 0.16
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF--EIVDDHRAGKIVVN 186
++D L + N + G +V+ PCSKV++ L ++++ GYI F E+ D + V
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESFTEEVRGDSGIKVLKVF 65
Query: 185 LTGLNKCGVISP--RFDVPINDIERWTNLLPS--RQFGYLVLTTSGAIMDHEEAR 33
L N I R P + + +P G +++TS IM AR
Sbjct: 66 LKYFNSAAAIRKIVRVSRPGKRVYSSADKMPRFYNALGIYIVSTSKGIMLDSHAR 120
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 35.9 bits (79), Expect = 0.37
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -1
Query: 221 VDDHRAGKIVVNLTG-LNKCGVISPRFDVPINDI 123
VDDH++G+I++ G LNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.65
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = -1
Query: 365 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 222
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q81VR6 Cluster: 30S ribosomal protein S8; n=96; cellular
organisms|Rep: 30S ribosomal protein S8 - Bacillus
anthracis
Length = 132
Score = 34.7 bits (76), Expect = 0.86
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Frame = -1
Query: 377 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGK 198
MV + ++D L I NA + + L P SK+ + ++ + G+I + E ++D++ G
Sbjct: 1 MVMTDPIADMLTRIRNANMV-RHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGI 59
Query: 197 IVVNLT-GLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGAIMDHEEAR 33
+ + L G N VI+ R P + + +P G +++TS +M ++AR
Sbjct: 60 LRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDAR 119
Query: 32 R 30
+
Sbjct: 120 Q 120
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 33.9 bits (74), Expect = 1.5
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 6/114 (5%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAG--KIVVN 186
++D L + NA K +V+ P S + + ++ + GYI ++ V+D G K+ +
Sbjct: 5 IADYLTRLRNAIG-AKHRVVEVPASNLKKEITKILFEKGYILNYKFVEDGPQGTIKVALK 63
Query: 185 LTGLNKCGVISPRFDVPINDIERWTNL--LPS--RQFGYLVLTTSGAIMDHEEA 36
+NK I V + ++T +P G +++TS +M ++EA
Sbjct: 64 YDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRVINGLGIAIISTSKGVMTNKEA 117
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 2.6
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +2
Query: 302 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 418
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.1 bits (72), Expect = 2.6
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 374 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIVDDHRA 204
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q22ZD3 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 853
Score = 33.1 bits (72), Expect = 2.6
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = -1
Query: 200 KIVVNLTGLNKCGVISPRFDVPINDIERWTNL---LPSRQFGYLVLTTSGAIMDHEEARR 30
KI+ L +++ G I D+ N IE T L LPS+ GY++ + A +++++R
Sbjct: 404 KILERLNEIDRAGKIVVIVDLDANTIEEDTFLNIQLPSKAKGYIIKELTKAEYEYKQSRE 463
Query: 29 KHLEEK 12
K+ EK
Sbjct: 464 KNAWEK 469
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 32.7 bits (71), Expect = 3.5
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -1
Query: 290 CSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGLNKCGVISPRFDVPINDIERWT 111
C K K T H Y +E + A K++ + K IS D+ I +E W
Sbjct: 284 CLKEGEKRTTCYYAHPY-SSWERGSNENANKLIRRF--IPKGADISKYSDIQIKQVENWI 340
Query: 110 NLLPSRQFGY 81
N P R FGY
Sbjct: 341 NNYPRRMFGY 350
>UniRef50_A2QSW7 Cluster: Contig An08c0340, complete genome; n=2;
Trichocomaceae|Rep: Contig An08c0340, complete genome -
Aspergillus niger
Length = 1186
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 136 PSTILKDGLICSPHDSLVT*SLQQVVPSWTMKKPE-ENTW 20
P + GLI +PH SL+ S ++ +P+W + P+ E W
Sbjct: 899 PLQLYSSGLIFAPHRSLIKESFERELPAWLSRGPKVEEYW 938
>UniRef50_Q62GL9 Cluster: 30S ribosomal protein S8; n=68;
Bacteria|Rep: 30S ribosomal protein S8 - Burkholderia
mallei (Pseudomonas mallei)
Length = 131
Score = 32.7 bits (71), Expect = 3.5
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Frame = -1
Query: 359 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLT 180
++D L I NA+ K V + P SKV V V+ GYI +F + D ++ + L
Sbjct: 7 IADMLTRIRNAQMVEKVSVSM-PSSKVKVAIAQVLKDEGYIDDFAVKADGAKAELNIALK 65
Query: 179 GLNKCGVIS--PRFDVPINDIERWTNLLPS--RQFGYLVLTTSGAIMDHEEAR 33
VI R P + R N +P G +++T +M +AR
Sbjct: 66 YYAGRPVIERLERVSKPGLRVYRGRNEIPQVMNGLGVAIVSTPKGVMTDRKAR 118
>UniRef50_Q749V8 Cluster: Putative uncharacterized protein; n=4;
Geobacter|Rep: Putative uncharacterized protein -
Geobacter sulfurreducens
Length = 111
Score = 32.3 bits (70), Expect = 4.6
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 251 KHGYIGEFEIVDDHRAGKIVVNLTGLNKCGVISPR-FDVPINDIERWTNLLPSRQFGY 81
K+G++ + +V HR + + L G K G PR D P D W + PS F Y
Sbjct: 23 KNGFLVDVRMVKRHRQYEAALFLNGRYKPGPPLPRPLDNPSGDTTHWMGVRPSVGFTY 80
>UniRef50_Q0P3I4 Cluster: Mitochondrion, complete genome; n=1;
Ostreococcus tauri|Rep: Mitochondrion, complete genome -
Ostreococcus tauri
Length = 124
Score = 31.9 bits (69), Expect = 6.0
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = -1
Query: 368 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVV 189
M +L+ S+ N + ++Q++ P SK LTV++ HGYI + R KI V
Sbjct: 1 MKLLTQMFTSLRNGQM-SRKQIVHMPYSKFCWNVLTVLLFHGYIQGMQ----KRDTKIFV 55
Query: 188 NLTGLNKCGVISPRFDVPINDIERWTNLL----PSRQFGYLVLTTSGAIMDHEEA 36
L + + I + +T P + G L+++TS IM +A
Sbjct: 56 VLKYIKEQPAIKKLEQISSASQRVYTPYTQLKSPQQGLGLLLVSTSKGIMSSAQA 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 411,366,573
Number of Sequences: 1657284
Number of extensions: 7522301
Number of successful extensions: 16293
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 15993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16261
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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