Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a16r
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   170   1e-44
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    65   7e-13
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    42   6e-06

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  170 bits (414), Expect = 1e-44
 Identities = 75/91 (82%), Positives = 89/91 (97%)
 Frame = -2

Query: 719 PNPNKFDPDNFLPERSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRVISD 540
           PNP+ FDPDNFLPE++ANRHYYAFVPFSAGPRSCVGRKYAMLKLK++LSTILRNFRV SD
Sbjct: 455 PNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLSTILRNFRVRSD 514

Query: 539 LKESDFKLQADIILKRAEGFQVRLQPRKRMA 447
           +KES+F+LQADIILKRA+GF++RL+PRK++A
Sbjct: 515 VKESEFRLQADIILKRADGFKIRLEPRKQVA 545


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 64.9 bits (151), Expect = 7e-13
 Identities = 27/57 (47%), Positives = 40/57 (70%)
 Frame = -2

Query: 719 PNPNKFDPDNFLPERSANRHYYAFVPFSAGPRSCVGRKYAMLKLKVILSTILRNFRV 549
           PNP+ FDP+ F  +  A+RH   ++PF  GPR+C+G ++A+ + KV L TILRN +V
Sbjct: 411 PNPDSFDPERFDQDAMASRHPMHYLPFGDGPRNCIGARFAVYQTKVGLITILRNHKV 467


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
 Frame = -2

Query: 722 LPNPNKFDPDNFLPER---SANRHYYAFV-PFSAGPRSCVGRKYAMLKLKVILSTILRNF 555
           L   N  D   +LPER       H    V PF AG R C G+++  L L++IL+ I+R F
Sbjct: 428 LNEENFKDAKKYLPERWTTPTTPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKIIREF 487

Query: 554 RVISDLKESDFKLQADIIL 498
            +I    E +  LQ + IL
Sbjct: 488 EII---VEEELDLQFEFIL 503


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,333
Number of Sequences: 438
Number of extensions: 3383
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)