Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a16f
(660 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 36 0.022
SB_51609| Best HMM Match : p450 (HMM E-Value=0) 35 0.051
SB_1738| Best HMM Match : p450 (HMM E-Value=0) 33 0.21
SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10) 31 0.63
SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43) 31 0.63
SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 30 1.9
SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_42553| Best HMM Match : VLPT (HMM E-Value=1) 29 2.5
SB_15630| Best HMM Match : p450 (HMM E-Value=0) 29 2.5
SB_21442| Best HMM Match : p450 (HMM E-Value=0) 29 3.4
SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_51175| Best HMM Match : p450 (HMM E-Value=0) 29 4.4
SB_35141| Best HMM Match : p450 (HMM E-Value=0) 29 4.4
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 29 4.4
SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_588| Best HMM Match : p450 (HMM E-Value=0.17) 28 5.9
SB_58979| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_2334| Best HMM Match : p450 (HMM E-Value=0) 28 5.9
SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09) 28 7.7
SB_8320| Best HMM Match : p450 (HMM E-Value=0) 28 7.7
>SB_6244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 455 RFFKPWLGNGLLIS-TGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 610
RFF+ LG L+ +G W+ HR+LI+P F + D+ N +R ++D+
Sbjct: 97 RFFQNVLGQFSLVGLSGDLWKKHRRLISPFFGRTYMTFASDIANQQTRKLIDR 149
>SB_2459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 431 YIDKAEEYRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDK 610
+ D+ + +P L + L I G++W+ R ++PTF + +KS + L N ++ K
Sbjct: 120 FYDRPVPFELPEP-LDSFLSIVRGERWKRIRNTLSPTFTAHNMKSMVPLINVPCDTLMKK 178
Query: 611 LKKEASNFDCHD 646
++K A + D
Sbjct: 179 IEKAAETGETFD 190
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 461 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDC 640
F P L L +G++WR+ R ++P F + LKS + L N ++K+ + A
Sbjct: 16 FSPPLDKMLNALSGEEWRNLRHTLSPNFSAHKLKSMVPLMNKACDVYMEKITRAAETRAT 75
Query: 641 HDYM 652
D M
Sbjct: 76 IDVM 79
>SB_51609| Best HMM Match : p450 (HMM E-Value=0)
Length = 526
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 461 FKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDC 640
F P L L I G++WR+ R ++P F + LK + L N + K+ A +
Sbjct: 139 FSPPLDKMLTILPGEEWRNLRHALSPNFSAHKLKGMVPLMNKACDVYMKKIACAAETGET 198
Query: 641 HDYM 652
D M
Sbjct: 199 IDVM 202
>SB_1738| Best HMM Match : p450 (HMM E-Value=0)
Length = 484
Score = 33.1 bits (72), Expect = 0.21
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +2
Query: 347 VVKIWIGPRLLVFLYDPRDVE--VILSSHVYIDKAEEYRFFKPW--LGNGLLISTGQKWR 514
V K++IG + + DP V+ VI H + ++ F KP + +G+ + G W+
Sbjct: 65 VHKMFIGRAAAIVVSDPEIVKQIVIKEFHKFPNRP---LFIKPNPPMDSGMFLGQGALWK 121
Query: 515 SHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHD 646
R + PTF LK + + + + + K+ A+ + D
Sbjct: 122 RIRTTLTPTFSTAKLKQIVPIIDKATATLQSKMASFAATGESTD 165
>SB_1725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +2
Query: 347 VVKIWIGPRLLVFLYDPRDVEVILSSHVYIDKAEEYR-----FFKPWLGNGLLISTGQK- 508
++ W +VF+ P V+ +L ++ Y + + G G+L
Sbjct: 79 IIVFWAFHNPVVFVVSPEMVKKVLVTYDLPKSTRVYEKLQFVYNQRCTGRGILTEPDPSA 138
Query: 509 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKL 613
W R L+ P FH L + + FN ++DKL
Sbjct: 139 WHKKRTLLNPAFHRKNLMNLMSPFNVICERMIDKL 173
>SB_57069| Best HMM Match : GETHR (HMM E-Value=1.7e-10)
Length = 547
Score = 31.5 bits (68), Expect = 0.63
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 365 GPRLLVFLYDPRDVEVILSSHVYIDKAEEYRFF-KPWLGNGLLISTGQKWRSHRKLIAPT 541
G + V + DP ++ IL + + F K + GL S + W+ R + PT
Sbjct: 86 GKNVEVIVADPDMLKQILVKEFSSFRNRHFAFPPKGLIRLGLFASKDEDWKRVRSTLTPT 145
Query: 542 FHLNVLKSFIDLFNANSRAVVDKLKKEA 625
F +K+ I L + + ++ KL + A
Sbjct: 146 FTSGKMKTMIPLVSKSCDTLIQKLGEVA 173
>SB_15628| Best HMM Match : p450 (HMM E-Value=1.20512e-43)
Length = 440
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 503 QKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASN 631
+KW R ++P F + +K + L N++ +++KL K A +
Sbjct: 139 EKWHRIRNTLSPAFSAHKMKLMVPLINSSCDVLINKLTKVAES 181
>SB_51668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 493 DKKTVSEPWFEETVFLSFIDVNVTTQ 416
D T+++PW T+ F+D+N TQ
Sbjct: 44 DTYTITQPWISYTITQPFLDINTITQ 69
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -3
Query: 532 DKFTMRPPFLTSTDKKTVSEPWFEETVFLSFIDVNVTTQ 416
D +T+ P+++ T ++ PW T+ F+D+N TQ
Sbjct: 116 DTYTITQPWISYT----ITHPWISYTISQPFLDINTITQ 150
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 243 LQDFRYSGTPWNSS-VDLLTSSE-T*FRKALTTITNPSLRSG*DLVSSSFCTILATWKSS 416
L+ + Y+G N + DL S+ + KAL IT+ D+ S I T S
Sbjct: 2015 LRGWTYTGEALNQARADLFAKSKRSNVAKALIMITDGYSNDAVDVPSKKLRDIGVTVLSV 2074
Query: 417 *VVTFTSIKLRNTVSSNHGSETVF 488
V SIK NT++++ SE VF
Sbjct: 2075 GVGKHVSIKQLNTIATDPDSENVF 2098
>SB_1809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +2
Query: 452 YRFFKPWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 625
+R + + +G+ +T KW+ R + PTF L+ + ++DK+ K A
Sbjct: 15 FRDTRSEMRHGMFSATDDKWKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVA 72
>SB_42553| Best HMM Match : VLPT (HMM E-Value=1)
Length = 399
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 491 ISTGQKWRSHRKLIAPTFHLNVLK 562
I TG KWR HR L+ H LK
Sbjct: 322 IVTGDKWRDHRHLLPQELHWKFLK 345
>SB_15630| Best HMM Match : p450 (HMM E-Value=0)
Length = 965
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 506 KWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASN 631
KW R ++P F + +K + L N++ +++KL K A +
Sbjct: 140 KWHRIRTSLSPAFSAHKMKLMVPLINSSCDVLINKLTKIADS 181
>SB_21442| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 467 PWLGNGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK 616
P L + + ++ KW+ RK+IAP F + LK + L + + KL+
Sbjct: 121 PPLDSEMFLAKYPKWKRVRKVIAPAFSGSKLKGTVGLIEGAAERMNAKLE 170
>SB_33020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -3
Query: 511 PFLTSTDKKTVSEPWFEETVFLSF-IDVNVTTQDDFHVARIVQKDEETRSYPDLNDGF 341
PFL TDK SE + +E LS N F+V KD +TR PD ++ F
Sbjct: 255 PFLDITDKVLTSENYADERGLLSIEFHPNYVRNGKFYVYYSTFKDNKTR--PDNDEPF 310
>SB_51175| Best HMM Match : p450 (HMM E-Value=0)
Length = 408
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 509 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK---KEASNFD-CHDYM 652
WR R + PTF LK + L + + R +V++L K+ + D C Y+
Sbjct: 40 WRRLRHFVTPTFSAVKLKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYV 91
>SB_35141| Best HMM Match : p450 (HMM E-Value=0)
Length = 565
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 479 NGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 625
+G+ +T KW+ R + PTF L+ + ++DK+ K A
Sbjct: 125 HGMFSATDDKWKRIRSTLTPTFTSGKLRQMNPKIRESCDTLMDKIGKVA 173
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 183 TPTGECQGGGCMSLLTN*MGLQDFRYSGTPWNSSVDLLT 299
T G C GGG ++ Q F YS WNS + T
Sbjct: 168 TDLGSCGGGGWTLVMKIDGNKQTFSYSSPKWNSMAEYQT 206
>SB_14189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +2
Query: 509 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLK---KEASNFD-CHDYM 652
WR R ++ PTF +K + L + + R +V++L K+ + D C Y+
Sbjct: 40 WRRLRHIVTPTFSAVKIKQVVPLISESCRILVEQLGQACKDGKSVDVCRTYV 91
>SB_588| Best HMM Match : p450 (HMM E-Value=0.17)
Length = 304
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 509 WRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHD 646
W+ R +++P FH K + +FNA + KL+ AS+ + D
Sbjct: 139 WKRKRGMLSPAFHRLWFKDSMGMFNAVCDKFLVKLEGYASSGEAVD 184
>SB_58979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 80 LNMSYTNAENVVPTSTFSAINLFYVLLVPAVILWYAYWRMSRRRL--YELADKLN 238
+ +S+T+ + +A+ LF LV +I+ ++ W++SR R+ YE + K++
Sbjct: 160 VGLSFTSYSTIFGFIGVTAVLLFVFGLVMYIIVQHSLWKLSRPRVNPYENSTKIS 214
>SB_2334| Best HMM Match : p450 (HMM E-Value=0)
Length = 498
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/58 (22%), Positives = 25/58 (43%)
Frame = +2
Query: 479 NGLLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEASNFDCHDYM 652
+G+ +T W+ R + PTF L+ + ++DK+ K A + D +
Sbjct: 125 HGMFSATDDNWKRIRSTLTPTFTSGKLRQMTPKMRESCDTLMDKIGKVADTGESVDIL 182
>SB_22117| Best HMM Match : p450 (HMM E-Value=1.1e-09)
Length = 307
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 485 LLISTGQKWRSHRKLIAPTFHLNVLKSFIDLFNANSRAVVDKLKKEA 625
+ + G+ W R ++P F + +K + L N + ++ KL++ A
Sbjct: 2 MFFAEGETWHRVRTTVSPIFSAHKMKMVLPLMNNSCDIMMSKLQQAA 48
>SB_8320| Best HMM Match : p450 (HMM E-Value=0)
Length = 1207
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +2
Query: 377 LVFLYDPRDVEVILSSHVYIDKA------EEYRFFKPWLGNGLLISTGQKWRSHRKLIA 535
+V + DP DV+++L S K ++YR + + GL + G++W HR +++
Sbjct: 782 VVSISDPDDVQMVLRSESKFPKRSLLPLIDQYRQLRQ-VPPGLAFAVGEEWYKHRTVLS 839
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,290,012
Number of Sequences: 59808
Number of extensions: 388574
Number of successful extensions: 938
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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