Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a14f
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   9.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   9.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   9.9  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 100 TFIMIY*FVFVLTLF*YPLDVKGC*VV 20
           TF +I+  VFV TL    L + GC VV
Sbjct: 209 TFAIIHLSVFVYTLVSVILIIMGCDVV 235


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 365 CRYQLRTATRKRSLLPSATREPDLQPHSSDRTG 463
           C+Y  R  T+  +LL       D +P+S D  G
Sbjct: 82  CKYCNRQFTKSYNLLIHERTHTDERPYSCDICG 114


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = -2

Query: 576 PQLRVLPALVVQERQALR 523
           P+L+  PA++V +R++LR
Sbjct: 181 PRLQRCPAMLVFDRRSLR 198


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -2

Query: 378  SWYRQGSG 355
            +WYRQG G
Sbjct: 2331 AWYRQGDG 2338


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 313 RRLQRARCTYLIVAARPLPIPA 378
           +RLQ A    L ++ARPL  P+
Sbjct: 171 KRLQEAELEKLRLSARPLLPPS 192


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 133 YWCKRIPTIP 162
           YW   IPT+P
Sbjct: 320 YWLNEIPTMP 329


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 147 YPYNPYYGNVDSLS 188
           Y   PYY N+D LS
Sbjct: 253 YNNYPYYSNMDYLS 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,756
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)