Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a13r
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.65 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.86 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.1  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +2

Query: 161 TVYCFFFYKMEAT--NFRYTFYNINRYFNTTIYKNL 262
           TVY  ++   EA+  NF YT      + +T IY NL
Sbjct: 155 TVYYIYYSVHEASIINFGYTLAKFMIFTSTCIYTNL 190


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 14/50 (28%), Positives = 28/50 (56%)
 Frame = -3

Query: 354 SIHNALVIAQIFI*VPSS*HNNDDNTIPNKFKFLYIVVLK*RFIL*NVYL 205
           SI++ ++I++IF  +P   H+  +  +P  +   + VVL     + +VYL
Sbjct: 6   SINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGSFIVSVYL 55


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 252 YIVVLK*RFIL*NVYLKLVASI 187
           ++VVLK +F + N Y+K V  +
Sbjct: 187 FVVVLKQKFCVVNQYIKQVCKL 208


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 252 YIVVLK*RFIL*NVYLKLVASI 187
           ++VVLK +F + N Y+K V  +
Sbjct: 12  FVVVLKQKFCVVNQYIKQVCKL 33


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +1

Query: 610 NSCCGRCYVKCEQKTNDYYFY*NYYHIANLDCF 708
           N C  +C       T  Y F   +YH  +  C+
Sbjct: 42  NPCARKCVKDSVPMTCRYTFLLEWYHTLSKACY 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,823
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)