Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a13f
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.74 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   0.98 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   6.9  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.1  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 241 IEVKRSNIQSYAAENSAGNSQVILDSLNN 327
           IE K  NIQ    +N A   +++LD +N+
Sbjct: 455 IEQKVKNIQMLVYQNEAEEVKILLDVINH 483


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +1

Query: 241 IEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTR--GLFRICYPK 381
           +E  R+  Q ++  +   +   ++  L+   +F +RT   GLF +CYP+
Sbjct: 111 VESLRAVAQQHSPADLENHFVPLVQRLSAGDWFTSRTSACGLFSVCYPR 159


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = +3

Query: 270  IRCGELGGQLAGHPRQLEQQIFLLHQNERSFPHLLP 377
            + C E  G ++ HP + + +++ + + ER   H +P
Sbjct: 913  VTCDEEEGHISYHPDKADCRMYYMCEGERK--HHMP 946


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = -3

Query: 477 FGFVVLVGNEVVYITAVSLHRRQVDFNCRRS 385
           FG  +  G  ++Y   V   +   DF CR +
Sbjct: 121 FGVHLAYGVVIIYSICVQTEKSVFDFLCRHT 151


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 408 VDFNCRRSFFRVADAE 361
           V+FN R S+FR++ A+
Sbjct: 26  VNFNHRESYFRLSKAK 41


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 216 GYGH*SSSHDCCNSRYRQSY 157
           G+GH +SSH+     Y  +Y
Sbjct: 290 GHGHNTSSHNYYAQNYAPTY 309


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 544 AFLTLFIAFWTGVVGCWKRSPGNITATAILMLVTCLLSAGA 666
           A LT  + F  GVV  + R P +I     + L    ++A A
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQA 228


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = +1

Query: 544 AFLTLFIAFWTGVVGCWKRSPGNITATAILMLVTCLLSAGA 666
           A LT  + F  GVV  + R P +I     + L    ++A A
Sbjct: 188 AMLTNAVCFVPGVVAMFSRKPCSINENLKMGLDIASITAQA 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,647
Number of Sequences: 336
Number of extensions: 2563
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)