Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a12f
(571 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 73 1e-13
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 72 3e-13
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 71 9e-13
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 69 2e-12
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 61 5e-10
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 61 5e-10
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 41 8e-04
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 34 0.069
04_03_0920 + 20826876-20829293 31 0.65
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.0
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 2.6
04_03_0923 + 20843477-20845044,20846081-20846996 29 2.6
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362... 28 6.0
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 6.0
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 6.0
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 6.0
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 27 8.0
03_03_0225 - 15587557-15588774 27 8.0
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +2
Query: 167 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 346
K GTDEK I + R +A + Y + L +KSE +GN E ++ ++
Sbjct: 168 KRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFELALLTILRCA 227
Query: 347 PH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 517
+ ++AK L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL + +T
Sbjct: 228 ENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSET 287
Query: 518 SGHFKRLCVSL 550
SG+++ +SL
Sbjct: 288 SGNYRTFLLSL 298
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
LRK+MKG GTD+ +I V+ R + I + Y K L + SE +GN +++
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLS 297
Query: 332 LM 337
L+
Sbjct: 298 LV 299
Score = 34.7 bits (76), Expect = 0.052
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 359 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 538
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG ++L
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 539 CVS 547
++
Sbjct: 136 LLA 138
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 72.1 bits (169), Expect = 3e-13
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
LRKA +G+GT+E II +L R QR I + YG++L+ + E++G+ E ++
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI- 78
Query: 332 LMTPLPHFYAKELHDAVSG---IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 502
L T P L + V+ G+ ++EI C + + Y + + +SLE D
Sbjct: 79 LWTLDPAERDAVLANEVARKWYPGSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEED 138
Query: 503 LKGDTSGHFKRLCVSLCMANRDE 571
+ +G F++L V L A R E
Sbjct: 139 VAAHATGDFRKLLVPLISAYRYE 161
Score = 64.5 bits (150), Expect = 6e-11
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Frame = +2
Query: 167 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 334
K +G DE II +L R Q + + YG KDL ++ K E L +I
Sbjct: 184 KAYGDDE--IIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFLSTLRAIIRCF 241
Query: 335 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 514
P ++ K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + GD
Sbjct: 242 CCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGD 300
Query: 515 TSGHFKRLCVSL 550
TSG ++R+ ++L
Sbjct: 301 TSGDYERMLLAL 312
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Frame = +2
Query: 176 GTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM------ 337
G+ + ++++ C RG Q + + + + + L ++ + TG+ ++V L+
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISAYRYE 161
Query: 338 -----TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 502
T L H AK LH+ + ++ II IL T S + Y YG + D
Sbjct: 162 GPEVNTKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKD 221
Query: 503 LKGDTSGHF 529
LK D F
Sbjct: 222 LKADPKDEF 230
Score = 35.5 bits (78), Expect = 0.030
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 365 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCV 544
+L A G GT+E II IL R I Y YG+ L + + SG F+R +
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Query: 545 --SLCMANRD 568
+L A RD
Sbjct: 79 LWTLDPAERD 88
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
+R A+ G GTDE ++ ++ R V I E ++ L + + +G+ E +++A
Sbjct: 252 IRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYERMLLA 311
Query: 332 LM 337
L+
Sbjct: 312 LL 313
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 70.5 bits (165), Expect = 9e-13
Identities = 46/137 (33%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
LRKA KG+GT+EK II +L R QR I + YG++L+ L E+ G E ++V
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE-LLVP 78
Query: 332 LM-----------TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL 478
L+ T L H AK LH+ + ++ II IL T S + Y
Sbjct: 79 LVTVYRYDGPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQ 138
Query: 479 YGKSLESDLKGDTSGHF 529
+G + DLK D F
Sbjct: 139 FGHPITKDLKADPKDEF 155
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Frame = +2
Query: 167 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYG----KDLISELKSELTGNLENVIVAL 334
K + DE II +L R Q L ++ +G KDL ++ K E G L +I
Sbjct: 109 KAYSDDE--IIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFLGTLRAIIRCF 166
Query: 335 MTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 514
P ++ K + A+ G+GTDE ++ I+ T + ++ I Y++ LE + D
Sbjct: 167 TCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKD 225
Query: 515 TSGHFKRLCVSL 550
T+ ++ + ++L
Sbjct: 226 TTRDYEDILLAL 237
Score = 33.5 bits (73), Expect = 0.12
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 362 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 538
++L A G GT+E+ II IL R I Y + YG+ L L + G F+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELL 76
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
+R A+ G GTDE ++ ++ R V I E ++ L + + T + E++++A
Sbjct: 177 IRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERAVAKDTTRDYEDILLA 236
Query: 332 LM 337
L+
Sbjct: 237 LL 238
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
L KA +G+GTDE+A+I VL R QR +I T++ NY ++LI L+SEL+G+LE +
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAMYH 79
Query: 332 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 439
+ A ++ A I D I+EI CT S+
Sbjct: 80 WVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +2
Query: 311 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 490
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 491 LESDLKGDTSGHFKR 535
L L+ + SG +R
Sbjct: 61 LIQRLQSELSGDLER 75
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 61.3 bits (142), Expect = 5e-10
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
L +A KGFG D A+ +L R QR I + Y +DL+ L +EL+G+ + ++
Sbjct: 20 LHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGHHKRAVLL 79
Query: 332 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY----GKSLES 499
+ A LH A++G TD A E++C+ + + + Y + G LE
Sbjct: 80 WVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEH 139
Query: 500 DLKGDTSGHFKRLCVSLCMANRDE 571
D+ SG +RL ++ + R E
Sbjct: 140 DVAVRASGDHQRLLLAYLRSPRYE 163
Score = 54.4 bits (125), Expect = 6e-08
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Frame = +2
Query: 287 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 454
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 455 ISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANR 565
I A Y + Y +SL + +TSG+++ +SL +R
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYRTFLLSLIGRDR 346
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
L +AMKG GT++ +I V+ R V I + +Y + L + SE +GN +++
Sbjct: 281 LHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLS 340
Query: 332 LM 337
L+
Sbjct: 341 LI 342
Score = 35.9 bits (79), Expect = 0.023
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 19/156 (12%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKD----LISELKSELTGNLEN 319
L +A+ G TD +A +V+C R Q L + + + +G L ++ +G+ +
Sbjct: 92 LHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGGGGGGGLEHDVAVRASGDHQR 151
Query: 320 VIVALMTPLPHFYAKELHDAVSG--------------IGTDEEAIIEILCTLSNYGIRTI 457
+++A + P + E+ D + +GTDE I + S + +
Sbjct: 152 LLLAYLRS-PRYEGPEVVDMAAAARDARELYRAGERRLGTDERTFIRVFSERSAAHMAAV 210
Query: 458 SAFYEQLYGKSLESDL-KGDTSGHFKRLCVSLCMAN 562
+A Y +Y +SLE + + T+ + L SL N
Sbjct: 211 AAAYHHMYDRSLEKVIYRSCTAAYALALVFSLSEFN 246
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +2
Query: 347 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 526
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 527 FKR 535
KR
Sbjct: 73 HKR 75
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 61.3 bits (142), Expect = 5e-10
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +2
Query: 149 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 328
++RKA++G+GTDE A+I++L R QR EIA ++ Y + L+ L SEL+G+ + ++
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Query: 329 ALMTPLPHFYAKELHDAVSGIGTDE----EAIIEILCTLSNYGIRTISAFYEQLYGKSLE 496
AK ++A+ E ++E+ C S + + Y Y SLE
Sbjct: 125 LWTMDPAARDAKLANEALKKKKKGELRHIWVLVEVACASSPDHLVAVRKAYRAAYASSLE 184
Query: 497 SDL 505
D+
Sbjct: 185 EDV 187
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 194 IIDVLCRRGIVQRLEIAETFKTNYGKDLISELKS----ELTGNLENVIVALMTPLPHFYA 361
++ ++ R Q E ++ +GK + L +L L+ + L +P HF A
Sbjct: 243 VVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDGRRGDQLAAVLKAALWCLTSPEKHF-A 301
Query: 362 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLC 541
+ + ++ G+GTDEE + + + + + + Y+ Y ++ +D++GDTSG++
Sbjct: 302 EVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTL 361
Query: 542 VSL 550
++L
Sbjct: 362 LTL 364
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +2
Query: 311 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 490
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 491 LESDLKGDTSGHFK 532
L L + SG F+
Sbjct: 107 LLDRLHSELSGDFR 120
Score = 36.3 bits (80), Expect = 0.017
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 331
+R ++ G GTDE+ + + R V ++ E +K Y + ++++ + +G N ++
Sbjct: 304 IRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTTVTADVRGDTSGYYMNTLLT 363
Query: 332 LMTP 343
L+ P
Sbjct: 364 LVGP 367
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 359 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 511
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 40.7 bits (91), Expect = 8e-04
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +2
Query: 212 RRGIVQRLEIAET-FKTNYGKD-LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAV 382
R+ ++Q L +T F D L+S+ S L+G++ + L P ++ DA+
Sbjct: 58 RQDLIQLLSQQKTTFAVIPASDPLVSKHISILSGSIAIRVACLRASEPCVRDADIARDAL 117
Query: 383 SGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 547
G D + ++E++CT + + I Y+ Y SLE D+ TSG + ++
Sbjct: 118 FGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLA 172
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 34.3 bits (75), Expect = 0.069
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Frame = +2
Query: 170 GFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN-VIVALMTPL 346
G TD + ++++ RR Q + + + K+L ++ +E + + ++VAL T
Sbjct: 97 GGATDYRVLVEIFTRRKQNQLFFTNQAYLARFKKNLEQDMVTEPSHPYQRQLLVALATSH 156
Query: 347 PHFY-----------AKELHDAV-SGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGK 487
+ A+ L+DA SG+G+ DE I+E+ S +R Y+ +YG
Sbjct: 157 KSHHDELSRHIAKCDARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGH 216
Query: 488 SLESDLKGDTSGHFKR 535
LK + G F++
Sbjct: 217 DYTKALKKNGFGEFEQ 232
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 0.65
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 344 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 523
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 278 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 448
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 449 RTISAFYEQLYGKSLESD 502
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +2
Query: 305 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 478
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 479 YGKSL 493
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +2
Query: 290 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 469
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 470 EQLYGKSLESDLKGDTSG 523
++LY SD D +G
Sbjct: 407 DELYNVKQLSDSSSDGNG 424
>12_01_0461 +
3618414-3618782,3619664-3619794,3620177-3620294,
3620602-3620654,3620758-3620807,3620912-3621010,
3621511-3621620,3621773-3621900,3622071-3622161,
3622610-3622693,3622863-3623083,3623449-3623527,
3624134-3624283,3624326-3624470,3624604-3624983,
3625096-3625197
Length = 769
Score = 27.9 bits (59), Expect = 6.0
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = -1
Query: 526 VSRRVAF*VRFQALAVQLFVKCGYGTDTIVGKRAQDLDDGF--FVGSNS*DSI---VELL 362
+ RR+ VR L QL V G+ D ++GK + D+D G N + + ELL
Sbjct: 96 IFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVNEYSELL 155
Query: 361 SVE-VGQGSHQCDDD 320
E G G QC+ D
Sbjct: 156 GEEQKGIGVIQCNPD 170
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 368 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 469
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 6.0
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -1
Query: 202 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 50
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 49 FNSD 38
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 152 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 238
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +1
Query: 373 RCCLRNWNRRRSHHRDPVHAFQLWYPYHIRILRTTVRQEPGIGLKRR 513
RC R W R P H QL P R+ T R E G G RR
Sbjct: 630 RCQYREWIDTRRVLTPPSHVVQLELPEQYRV--TKARFERGEGSSRR 674
>03_03_0225 - 15587557-15588774
Length = 405
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 460 RILRTTVRQEPGIGLKRRHVGTLQ 531
R+ +TT R++ G GLKRR G ++
Sbjct: 291 RVKKTTARKKVGAGLKRRSFGGVE 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,601,124
Number of Sequences: 37544
Number of extensions: 287108
Number of successful extensions: 914
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -