Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a11r
(507 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 54 9e-09
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 54 2e-08
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 52 5e-08
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 49 4e-07
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 45 6e-06
SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|ch... 30 0.17
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 30 0.17
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 27 1.2
SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase |Schizosaccha... 26 2.8
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 26 2.8
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 25 8.6
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 25 8.6
SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyc... 25 8.6
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 54.4 bits (125), Expect = 9e-09
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEK-PXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSL 330
+IG+SNF IQ ++DS + P QIE + Q ++ I AY P
Sbjct: 135 AIGVSNFGPHHIQELLDSHPKIIPCVNQIELHPFCSQQKVVDYCESKGIQLAAYAPL--- 191
Query: 329 XPSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQ 150
+ +++L++IA KYNK+ Q +R+ ++ G +VLPKS R ++N
Sbjct: 192 --------VHGEKFGNKQLLAIASKYNKSEAQIMIRYCLQRGFIVLPKSSTPRRIKENGD 243
Query: 149 LXXFSXTPEEXNLXKSFD 96
+ F + E+ + D
Sbjct: 244 VFDFEISKEDMEKLYNLD 261
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 53.6 bits (123), Expect = 2e-08
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLE-KPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSL 330
S+G+SN+ +Q + S + P QIE + Q ++ K + +DI AY P
Sbjct: 142 SVGVSNYGVKHLQELYASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAIEAYSPL--- 198
Query: 329 XPSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQ 150
R++DE+LV IA+K N +V Q +R+ ++ G + + KS KE ++
Sbjct: 199 --------THGIRLNDEKLVPIAKKLNISVAQLLIRWSLQKGYIPIIKSTKKEHMLSDLD 250
Query: 149 LXXFSXTPEEXNLXKSFD 96
+ F+ + SFD
Sbjct: 251 VFNFTIPDDVVQELSSFD 268
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 52.0 bits (119), Expect = 5e-08
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXP 324
IG+SNF ++RI+ KP Q+E + Q E + ++ I AY PFG+
Sbjct: 164 IGLSNFNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPFGN--Q 221
Query: 323 SKAQPDAPPPRIDDERLVSIAQKYNK--TVPQXALRFLIELGAVVLPKSVHKERXEQNIQ 150
+ P I+ E + IA+ + T A+ + I G V+PKSV+++R + N +
Sbjct: 222 NTIYESKIPKLIEHETIQKIAKSKGEGVTGATIAVSWAITRGTSVIPKSVNEQRIKSNFK 281
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 49.2 bits (112), Expect = 4e-07
Identities = 32/136 (23%), Positives = 59/136 (43%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXP 324
IG+SN+ ++ II GL P Q+E + +P + I+ A+ P
Sbjct: 137 IGVSNYNIHHLEEIISLGLPLPAINQVEFSAFNNRPTFLSYCFNHGILVQAFSPL----- 191
Query: 323 SKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQLX 144
R+ D RL+ ++ KYNKT LR+ ++ G + K+ +N++
Sbjct: 192 ------TRGYRLSDIRLLDLSLKYNKTPANILLRYCLQKGVSPIFKASSFVHIHENVKAE 245
Query: 143 XFSXTPEEXNLXKSFD 96
F P + ++ ++D
Sbjct: 246 QFMLDPSDMDVMDTWD 261
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 45.2 bits (102), Expect = 6e-06
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXP 324
IGISNF + R++ KP Q+E + Q E + ++ I AY P +
Sbjct: 163 IGISNFNNEYLDRVLKIAKVKPTIHQMELHPYLPQTEYLEKHKKLQIHVSAYSPLAN--Q 220
Query: 323 SKAQPDAPPPRIDDERLVSIAQKYNK--TVPQXALRFLIELGAVVLPKSVHKERXEQN 156
+ A I+ + LV IA + T A+ + ++ G VLPKSV++ R N
Sbjct: 221 NDAYNSDISKLIEHKTLVDIANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVSN 278
>SPCC1281.04 |||pyridoxal reductase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 333
Score = 30.3 bits (65), Expect = 0.17
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = -2
Query: 266 IAQKYNKTVPQXALRFLIELG---AVVLPKSVHKERXEQNIQLXXFSXTPEE 120
+AQK+ ++P+ AL F+I G + +P S +R E N+ S + E+
Sbjct: 254 LAQKFGMSMPEFALNFIIANGKGMIIPIPGSTTVQRAESNLSALKKSLSSEQ 305
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.17
Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXN--LXXXQPELFKXXRENDIVXMAYXPFGS 333
S+G+SNF ++ ++ + P QIE + + L + + I+ Y P
Sbjct: 139 SVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIVEGYGPLSP 198
Query: 332 LXPSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNI 153
L P A E S+ KY+ + Q L++ G + + + ER ++ +
Sbjct: 199 LVRDAQGPVA-------EFTKSLESKYHVSDTQILLKWAYSKGVIPITTTSKIERMKECL 251
Query: 152 QLXXFS 135
F+
Sbjct: 252 NFDSFT 257
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 27.5 bits (58), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 122 EXNLXKSFDTGXRTLPQTKWSKHPDXPFQ 36
+ N+ + FD+ R L KW D PFQ
Sbjct: 730 DDNMQEVFDSADRPLDGNKWWSKADDPFQ 758
>SPCC4B3.05c |hem12||uroporphyrinogen decarboxylase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 2.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 257 SGRY*RGVHRQSSAEERLVEPCSXTATRREXTPSPLCRFRGXX*RALV 400
+GRY H+ A++ E C T E T P+ RF+G A++
Sbjct: 26 AGRYLPEYHKLR-AKQSFFEMCQTPETACELTLQPVTRFKGLLDAAII 72
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 26.2 bits (55), Expect = 2.8
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 118 NSSGVXLXSNSCMFCSILSLCTDLGRTTAPNSIRKRRAXCGTVLLYFW 261
N S V + C I+ CT+L + A GTVLLY +
Sbjct: 535 NQSAVLASQCANAICRIIQDCTELSISLAAPFTASSAYLAGTVLLYHY 582
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 24.6 bits (51), Expect = 8.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 482 QXQIQRIIDSGLEKPXALQI 423
Q Q+QR++ S E+P A Q+
Sbjct: 389 QQQLQRLVSSAKERPKATQL 408
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 24.6 bits (51), Expect = 8.6
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXN---LXXXQPEL--FKXXRENDIVXMAYXPF 339
IG+S I+R + + A+Q+E + L +PE+ K REN+I + Y P
Sbjct: 153 IGLSECSANTIRRA--AAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPL 210
Query: 338 G 336
G
Sbjct: 211 G 211
>SPCC11E10.05c |ynd1||nucleoside diphosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 572
Score = 24.6 bits (51), Expect = 8.6
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 248 KTVPQXALRFLIELGAVVLPKSVHKE 171
K V + L+ L++ A +PK VHKE
Sbjct: 67 KHVGKKHLKELLDFAAHAIPKDVHKE 92
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,604,933
Number of Sequences: 5004
Number of extensions: 22915
Number of successful extensions: 72
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 202220600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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