Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a11r
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 69 2e-12
10_01_0066 + 848523-849269,849520-849741 65 3e-11
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 64 5e-11
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 63 1e-10
10_01_0065 + 845447-846187,846969-847193 62 3e-10
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 60 1e-09
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 60 1e-09
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 57 9e-09
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 56 2e-08
04_01_0350 - 4610444-4610668,4612181-4612969 54 7e-08
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 51 6e-07
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 51 6e-07
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 50 8e-07
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 49 2e-06
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 48 6e-06
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 48 6e-06
07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657... 27 6.5
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 69.3 bits (162), Expect = 2e-12
Identities = 45/129 (34%), Positives = 67/129 (51%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF +++ ++ P Q+E + Q +L K I AY P GS
Sbjct: 150 AIGVSNFSSKKLEDLLAVARVPPAVDQVECHPVWQQTKLRKFCTSKGIHLSAYSPLGS-- 207
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
P A A + +VS A+K KT Q ALR+ I++G VLPKS H+ER ++NI +
Sbjct: 208 PGTASVKAVGNVLAHPVVVSTAEKLGKTPAQVALRWGIQMGHSVLPKSTHEERIKENIDV 267
Query: 146 XXFSXTPEE 120
+S PE+
Sbjct: 268 YDWS-IPED 275
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/129 (29%), Positives = 65/129 (50%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF ++++++ + +P A Q+E N Q L + R + Y P G
Sbjct: 163 AIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRREGVQLCGYSPLG--- 219
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+K P +D L IAQ KT+ Q LR++ E G V+L K+ ++ R ++N+ +
Sbjct: 220 -AKGTPWGSAAVMDSGVLHDIAQTKGKTLAQICLRWMYEQGDVLLVKTYNENRMKENLDI 278
Query: 146 XXFSXTPEE 120
+ T EE
Sbjct: 279 FDWELTEEE 287
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 64.5 bits (150), Expect = 5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF ++ ++ + P Q+E + Q +L + I AY P GS
Sbjct: 156 AIGVSNFSSKKLGDLLAAARVPPAVDQVECHPGWQQMKLHNFCQSTGIHLSAYSPLGSPG 215
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+ + + + ++SIA+K KT Q ALR+ I++G VLPKSV +ER +QN+ +
Sbjct: 216 STFMNGNV----LKEPIIISIAEKLGKTPAQVALRWNIQMGHSVLPKSVSEERIKQNLDV 271
Query: 146 XXFSXTPEE 120
+S PE+
Sbjct: 272 YDWS-IPED 279
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 62.9 bits (146), Expect = 1e-10
Identities = 40/129 (31%), Positives = 66/129 (51%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF ++ ++ P Q+E + Q +L + + AY P GS
Sbjct: 151 AIGVSNFSSKKLGDLLAVACVPPAVDQVECHPGWQQTKLHNFCQSTGVHLSAYSPLGSPG 210
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+ + + + ++SIA+K KT Q AL + I++G VLPKSV +ER +QNI +
Sbjct: 211 STWMNSNV----LKESVIISIAEKLGKTPAQVALHWNIQMGHSVLPKSVTEERIKQNIDV 266
Query: 146 XXFSXTPEE 120
+S PE+
Sbjct: 267 YDWS-IPED 274
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 61.7 bits (143), Expect = 3e-10
Identities = 37/129 (28%), Positives = 63/129 (48%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF ++++++ +P Q+E N Q L + R + Y P G
Sbjct: 161 AIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRREGVQLCGYSPLG--- 217
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+K P +D L IA KT+ Q LR+L E G V+L K+ +++R ++N+ +
Sbjct: 218 -AKGTPWGSAAVMDSGVLQEIAGAKGKTLAQICLRWLYEQGDVLLVKTYNEKRMKENLDI 276
Query: 146 XXFSXTPEE 120
+ T EE
Sbjct: 277 FNWELTDEE 285
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/129 (31%), Positives = 66/129 (51%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF +++ +++ P Q+E + Q +L K + + AY P GS
Sbjct: 92 AIGVSNFSCKKLEDLLNVARVPPAVNQVECHPVWQQGKLRKLCQSKGVHLSAYAPLGS-- 149
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
P D P + ++SIA+K K+ Q ALR+ I++G VLPKS ++ +NI +
Sbjct: 150 PGSPGNDGPNV-LSHPTVISIAKKLQKSPAQVALRWGIQMGQSVLPKSDNEVWTRENIDI 208
Query: 146 XXFSXTPEE 120
+ PEE
Sbjct: 209 FDW-CIPEE 216
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 59.7 bits (138), Expect = 1e-09
Identities = 36/128 (28%), Positives = 61/128 (47%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXP 324
IG+SNF ++Q ++ P Q+E N Q +L + + I AY P G
Sbjct: 173 IGVSNFTTKKLQELLAFAKIPPAVNQVELNPVWQQKKLMEFCKAKGIHVTAYFPLGG--- 229
Query: 323 SKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQLX 144
+ P +D + L IA K+V Q +LR++ E GA ++ S +ER ++NI +
Sbjct: 230 -RHSTSTVNPVLDSDVLKEIAAAKGKSVAQISLRWIYEQGASMVTTSTKRERLKENIDIF 288
Query: 143 XFSXTPEE 120
+ + E+
Sbjct: 289 DWQLSDED 296
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 56.8 bits (131), Expect = 9e-09
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Frame = -2
Query: 443 KPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXPSKAQPDAPPPRIDDERL-VS 267
KP QIE + + L K +++ I+ A+ P G + + +DD + VS
Sbjct: 196 KPAVNQIETHPYFQRDCLVKFCQKHGILVTAHTPLGG-STANTEWFGSVSCLDDPVIKVS 254
Query: 266 IAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQLXXFSXTPEEXNLXKSFDTGX 87
+A+KY KT Q LR+ ++ VV+PK+ +ER ++N + F+ + E+ +S D
Sbjct: 255 LAEKYGKTPAQLVLRWGLQRNTVVIPKTSKEERLQENFAVFDFAISDEDMEKMRSIDRKY 314
Query: 86 RTLPQTKW 63
RT K+
Sbjct: 315 RTNQPAKF 322
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 56.0 bits (129), Expect = 2e-08
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPF---G 336
+IG+SNF ++ ++ P A Q+E N Q +L + +E +I AY P G
Sbjct: 175 AIGVSNFTCKKLNTLLSFATIPPAANQVEINPYCRQNKLREFCKEKEIQLCAYSPLGASG 234
Query: 335 SLXPSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQN 156
++ S A D P L IA + KTV Q LR+L E G ++ KS ++ R +N
Sbjct: 235 TIWGSNAVLDCPV-------LKHIAVQKGKTVAQVCLRWLHEQGDCIIVKSFNERRMREN 287
Query: 155 IQLXXFSXT 129
+++ + T
Sbjct: 288 LEIFDWELT 296
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 54.0 bits (124), Expect = 7e-08
Identities = 35/129 (27%), Positives = 65/129 (50%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
SIG+SNF ++ R++ P Q+E N+ Q ++ + E +V AY P G+
Sbjct: 177 SIGVSNFSAAKMSRLLALAAVPPAVNQVEMNVGWRQEKVREVCGEGGVVVAAYSPLGA-H 235
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+ DA ++ L +A KT+ Q ALR+L E G ++ +S ++ R +QN+ +
Sbjct: 236 GAHWGSDAV---MNSGVLHDVAAARCKTIAQVALRWLYEQGVCMVARSFNEGRMKQNMDI 292
Query: 146 XXFSXTPEE 120
+ + ++
Sbjct: 293 FDWELSDQD 301
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 50.8 bits (116), Expect = 6e-07
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGS-- 333
+IG+SNF + +++ P Q+E N Q + + I AY P G
Sbjct: 161 AIGVSNFTTKHLDKLLAVATIPPAVNQVEMNPVWQQRTVREYCAAKGIRVAAYSPLGGQN 220
Query: 332 -LXPSKAQPDAPP-PRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQ 159
+ ++P I R SIAQ + Q +LR++ E G +PKS +KER +Q
Sbjct: 221 WIGEGNDVMESPVLADIARARGKSIAQGRIQIPGQVSLRWIHEQGVTPIPKSYNKERLKQ 280
Query: 158 NIQLXXFSXTPEE 120
N+++ + T E+
Sbjct: 281 NLEIFDWELTKED 293
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 50.8 bits (116), Expect = 6e-07
Identities = 33/129 (25%), Positives = 59/129 (45%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF I +++ P Q+E N Q + + I AY P G
Sbjct: 161 AIGVSNFTTKHIDKLLAVATILPAVNQVEMNPTWQQRTVREYCDAKGIRVTAYSPLG--- 217
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
+ + ++ L IA+ K++ Q +LR++ E G + KS KER ++N+++
Sbjct: 218 -GQNWGGSANYVMESSVLTEIARARGKSIAQVSLRWIYEQGVTPIAKSYRKERLKENLEI 276
Query: 146 XXFSXTPEE 120
+ T E+
Sbjct: 277 FDWELTDED 285
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 50.4 bits (115), Expect = 8e-07
Identities = 36/128 (28%), Positives = 63/128 (49%)
Frame = -2
Query: 503 IGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLXP 324
IG+ NF ++ R++ S P A+++ ++F+ +++ I AY P GS
Sbjct: 205 IGVCNFSVTKLNRLLQSA-NIPPAMEMHPG--WKNNKIFEACKKHGIHVTAYSPLGSSEK 261
Query: 323 SKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQLX 144
+ A D + IA K NKT Q +++ ++ G V+PKS ER ++N+Q+
Sbjct: 262 NLAH---------DPVVEKIANKLNKTPGQVLIKWALQRGTSVIPKSTKDERIKENMQVF 312
Query: 143 XFSXTPEE 120
+ PEE
Sbjct: 313 GWE-IPEE 319
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 48.8 bits (111), Expect = 2e-06
Identities = 37/129 (28%), Positives = 60/129 (46%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+SNF ++ ++ P Q+E + Q +L + + AY P G +
Sbjct: 151 AIGVSNFSSKKLGDLLCVARVPPAVDQVECHPGWQQAKLRAFCHTSGVHLSAYAPLGRMK 210
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVHKERXEQNIQL 147
D L S+A+ +T Q ALR+ ++ G VLPKSV + R ++N+ L
Sbjct: 211 GIAV----------DSVLPSVAEMLGRTPAQVALRWGLQQGQSVLPKSVSEARLKENMDL 260
Query: 146 XXFSXTPEE 120
+S PEE
Sbjct: 261 FGWS-IPEE 268
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 47.6 bits (108), Expect = 6e-06
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXA----------LQIEXNLXXXQPELFKXXRENDIVX 357
+IG+SNF +++ ++ P A +++E + Q +L + +E I
Sbjct: 160 AIGVSNFSCKKLETLLSFATISPAANQLKVRLFQIVEVEVHPYCRQNKLREFCKEKGIQL 219
Query: 356 MAYXPFGSLXPSKAQPDAPPPRIDDERLVSIAQKYNKTVPQXALRFLIELGAVVLPKSVH 177
AY P G K P + +D L IA + KT+ Q LR++ E G V+ KS +
Sbjct: 220 CAYSPLG----GKGTPWSNNAVMDCPLLKQIAMERGKTIAQVCLRWVYEQGDCVIVKSFN 275
Query: 176 KERXEQNIQLXXFSXTPEE 120
K R +N+ + + T ++
Sbjct: 276 KSRLRENLGIFDWELTNDD 294
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = -2
Query: 506 SIGISNFXQXQIQRIIDSGLEKPXALQIEXNLXXXQPELFKXXRENDIVXMAYXPFGSLX 327
+IG+ NF ++ ++ P Q+E N Q +L + RE + AY P G+
Sbjct: 158 AIGVCNFSCKKLDTLLSFATIPPAVNQVEVNPVWQQRKLRELCREKGVQICAYSPLGASG 217
Query: 326 PSKAQPDAPPPRIDDERLVSIAQKYNKTVPQ---XALRFLIELGAVVLPKSVHKERXEQN 156
+ L IAQ KTV Q LR++ E G ++ KS + R +N
Sbjct: 218 THWGSDSVMASAV----LRDIAQSKGKTVAQARHVCLRWVYEQGDCLIVKSFDEARMREN 273
Query: 155 IQLXXFSXTPEE 120
+ + + T EE
Sbjct: 274 LDIVGWELTEEE 285
>07_03_1482 -
26864793-26865043,26865325-26865454,26865564-26865771,
26867529-26867599,26867875-26867884,26869562-26870310
Length = 472
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = -1
Query: 405 AXTRALQXXPRKRHSGDGVXSLRVAVXEQGSTRRSSA 295
A RAL PR+R G RV V GS R A
Sbjct: 7 AGFRALHPRPRRRRHGGAEGKARVTVRRLGSNGRKEA 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,055,179
Number of Sequences: 37544
Number of extensions: 169109
Number of successful extensions: 430
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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