Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a11f
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    30   0.014
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   2.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   6.5  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.5  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   6.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   8.6  

>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 30.3 bits (65), Expect = 0.014
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +1

Query: 187 RASCHIRVGSWIHTHRHRVQIWNRGPSGKGPDQEI 291
           R  CHI + S+ +T R     WN GP+  G   E+
Sbjct: 178 RQLCHIEIESFGYTMRDIRYKWNEGPNSVGVSSEV 212


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = -2

Query: 429 IKYRSTYSRLRFSRDF---LSAGITCSLS 352
           +KYR TY RL  ++ F   ++A + CSL+
Sbjct: 391 LKYRETYFRLSKTKTFCTLVTALVYCSLA 419


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 202 IRVGSWIHTHRHRVQIWNRGPSGKGPDQEI 291
           I + S+ +T R     WN GP+  G   E+
Sbjct: 1   IEIESFGYTMRDIRYKWNEGPNSVGVSNEV 30


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 261 SSIPYLYAVSMCVYPASNAYM 199
           +S+PY      C+Y  S  Y+
Sbjct: 93  TSVPYDALTGQCIYSISRDYL 113


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 261 SSIPYLYAVSMCVYPASNAYM 199
           +S+PY      C+Y  S  Y+
Sbjct: 93  TSVPYDALTGQCIYSISRDYL 113


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 261 SSIPYLYAVSMCVYPASNAYM 199
           +S+PY      C+Y  S  Y+
Sbjct: 93  TSVPYDALTGQCIYSISRDYL 113


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 506 SYPATCPESPR 474
           SY A CP SP+
Sbjct: 91  SYAANCPPSPK 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,984
Number of Sequences: 336
Number of extensions: 3469
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)