Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a11f
(634 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 129 4e-31
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 117 2e-27
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 93 4e-20
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 79 7e-16
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 69 7e-13
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 65 7e-12
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 39 7e-04
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 33 0.034
SPBC19G7.10c |||topoisomerase associated protein |Schizosaccharo... 29 0.42
SPAC17G8.13c |mst2||histone acetyltransferase Mst2|Schizosacchar... 28 0.97
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 28 1.3
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor |Schizo... 27 2.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 27 2.3
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 27 3.0
SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces po... 26 3.9
SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein ... 26 5.2
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 9.1
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 25 9.1
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 129 bits (311), Expect = 4e-31
Identities = 72/188 (38%), Positives = 109/188 (57%), Gaps = 10/188 (5%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L +G IP + LGTW GK ++T+ AV AL+AGY HIDTA+ YG E ++G
Sbjct: 17 LPNGDKIPSIGLGTWRS----GK-----DETKNAVCAALKAGYRHIDTAHIYGNEKEIGE 67
Query: 275 ALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMF- 451
+ + G+ R I++T+KLW + H V AL K+L++LNLEY+D YLIHWP A+
Sbjct: 68 GIRES---GVPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFALLS 124
Query: 452 ---------ENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKP 604
+ + + ++V +TW+ M + + G + IGISNFN E + R++ KP
Sbjct: 125 GPEELPRNEKGELIYEDVPIEETWQAMEELLETGKVRYIGISNFNNEYLDRVLKIAKVKP 184
Query: 605 SALQIELN 628
+ Q+EL+
Sbjct: 185 TIHQMELH 192
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 117 bits (281), Expect = 2e-27
Identities = 69/188 (36%), Positives = 102/188 (54%), Gaps = 10/188 (5%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L+ G IP + LGTW N T+ AV AL+ GY HID A YG ED+VG
Sbjct: 18 LADGSKIPGLGLGTWRSE---------PNQTKNAVKTALQYGYRHIDAAAIYGNEDEVGD 68
Query: 275 ALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM-- 448
+ + G+ R+ I++T+KLW + H E V AL K+L++L L+Y+D YLIHWP++
Sbjct: 69 GIKES---GVPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFKT 125
Query: 449 ----FEND----TLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKP 604
F D + + +TW+ M + G + IG+SNFN ++RI+ KP
Sbjct: 126 GEDKFPKDKDGNLIYEKNPIEETWKAMEKLLETGKVRHIGLSNFNDTNLERILKVAKVKP 185
Query: 605 SALQIELN 628
+ Q+EL+
Sbjct: 186 AVHQMELH 193
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 92.7 bits (220), Expect = 4e-20
Identities = 57/172 (33%), Positives = 90/172 (52%)
Frame = +2
Query: 113 IPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKF 292
+P +GT L + KG++ + D+ V AL AG+ HID A YG E++VG AL +
Sbjct: 12 VPAYGVGTALFKKEKGEINRTIVDS---VKNALAAGFIHIDCAEVYGNEEEVGVALKEA- 67
Query: 293 SEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLD 472
+ R +FIT+K+ H + + AL +SL L +Y+DLYL+H PI +E
Sbjct: 68 --NVPRSKLFITSKVM---HNVDNIPEALNESLRKLGTDYLDLYLLHSPIPFYEK----- 117
Query: 473 NVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
+ + W+ M A GL S+G+SNF ++ ++ + P QIE +
Sbjct: 118 KIPISEGWKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFH 169
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 78.6 bits (185), Expect = 7e-16
Identities = 57/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%)
Frame = +2
Query: 89 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQV 268
++L++G P A G+++ +R K +V AL+ GY HID+A Y E
Sbjct: 6 VKLNNGLKCPQFAYGSYMVNRTK---------CFDSVYAALQCGYRHIDSAQMYHNEADC 56
Query: 269 GRALTKKFSE-GLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 445
GRA+ K E G KRE I+ T+KL N + + ++ S++ L Y+DL+L+H P
Sbjct: 57 GRAILKFMEETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPYG 115
Query: 446 MFENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLE-KPSALQIE 622
D +++W+ + + G ++IG+SNF IQ ++DS + P QIE
Sbjct: 116 -----------DRIESWKALEKGVEEGKLRAIGVSNFGPHHIQELLDSHPKIIPCVNQIE 164
Query: 623 LN 628
L+
Sbjct: 165 LH 166
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 68.5 bits (160), Expect = 7e-13
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 179 NDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSE-GLKRESIFITTKLWNSYHE 355
N+ V AL++GY HIDTA YG ED G+A+ + +KR IF+T+KL N +
Sbjct: 32 NECYGLVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANC-SD 90
Query: 356 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTK 535
A+R SL +L Y+DL+LI P + +W+ M + G +
Sbjct: 91 YYSTRAAIRSSLHHLG-TYIDLFLIQSPAG--------GKKSRIASWKAMEEFVDSGDIR 141
Query: 536 SIGISNFNQEQIQRIIDSGLE-KPSALQIELN 628
S+G+SN+ + +Q + S + P QIEL+
Sbjct: 142 SVGVSNYGVKHLQELYASNPKFYPCVNQIELH 173
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 65.3 bits (152), Expect = 7e-12
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Frame = +2
Query: 182 DTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEG--LKRESIFITTKLWNSYHE 355
D Q VI AL G ID+A Y E + +A+ + +KRE I + TK+ +S
Sbjct: 25 DCYQQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQG 84
Query: 356 REQVIPALRKSLENLNLEYVDLYLIH---WPIAMFENDTLLDNVDFLDTWRGMIDAKKLG 526
E+ A+ +SL +D+ LIH WP+ E+ WR ++ +K G
Sbjct: 85 FERTWKAVEQSLRRTGRPKLDVVLIHSPKWPVRRIES------------WRALLQHQKEG 132
Query: 527 LTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
IG+SN+N ++ II GL P+ Q+E +
Sbjct: 133 RINKIGVSNYNIHHLEEIISLGLPLPAINQVEFS 166
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 38.7 bits (86), Expect = 7e-04
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Frame = +2
Query: 101 SGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTA--YKYGIEDQV-G 271
SG + +LG WL + +G V+ T+ + A + G DTA Y G + V G
Sbjct: 21 SGLKVSAFSLGGWLTYGNEGYDVE---HTKNCLKQAWDLGINTFDTAEIYSNGNSETVMG 77
Query: 272 RALTK---KFSEGLKRESIFIT--TKLWNSYH-EREQVIPALRKSLENLNLEYVDLYLIH 433
+A+ + SE + +F TKL N+ R+ +I L SL+ L L YVD+ + H
Sbjct: 78 KAIKELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAH 137
Query: 434 WP 439
P
Sbjct: 138 RP 139
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 33.1 bits (72), Expect = 0.034
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 482 FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNLN 634
++DTW+ + + G ++G+S F ++QR+I S P + QI + N
Sbjct: 158 WVDTWKLLEEKVGEGKIGTLGVSEFGVNELQRLISSVNVVPESTQINIGQN 208
>SPBC19G7.10c |||topoisomerase associated protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 744
Score = 29.5 bits (63), Expect = 0.42
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 482 FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIEL 625
F+ T+ G + ++ G + Q+Q+QR++ S E+P A Q+ L
Sbjct: 364 FIQTYLGPSNNRRRGRRSENPMQKL-QQQLQRLVSSAKERPKATQLSL 410
>SPAC17G8.13c |mst2||histone acetyltransferase
Mst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 28.3 bits (60), Expect = 0.97
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 278 LTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM-FE 454
L KK+ LKR+ + K WN H ++V P L + L E + L+ I +
Sbjct: 335 LKKKYVLQLKRDELENVYKAWNIKHP-QRVNPKLLRWTPYLGEEQISNLLLKENILIPLP 393
Query: 455 NDTLLDNVDFLDT 493
LLDN LD+
Sbjct: 394 QKRLLDNSHHLDS 406
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 278 LTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 433
L +K + LK+ IF T L ++ ++P + K + NLN + D Y IH
Sbjct: 77 LCRKLASTLKQRVIFFTRVLL-TFFCWTVLLPLIFKHVWNLNFKIGDTYTIH 127
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -2
Query: 534 LVRPSFLASIIPRHVSRKSTLSSKVSFSNI 445
L+ PSF A I RHV + T S+ V N+
Sbjct: 698 LIEPSFTAKIFARHVLLEKTKSTLVVKKNV 727
>SPCC417.05c |chr2|cfh2|chitin synthase regulatory factor
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 179 NDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGL 304
N+ E +Y + A H+ AY+ I Q+G +T+ E +
Sbjct: 244 NEKEAYRLYKMAADLNHVQAAYRVAICLQMGFGVTQNTEEAI 285
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/50 (24%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 350 HEREQVIPALRKSLENLNLEYVDLYLIHWP--IAMFENDTLLDNVDFLDT 493
H+++++I + + N NLE+V L +H I + ++L +N +++ +
Sbjct: 482 HKKQRLIKQITNIMHNFNLEFVTLSYLHSKGIITTSQLESLRNNTEWISS 531
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 26.6 bits (56), Expect = 3.0
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = +2
Query: 416 DLYLIHWPIAMFENDTLLDNVDFLDTWRGMID--AKKLGLTKSIGI--SNFNQEQIQRII 583
+LY+ H + F +L+N++ LD MI + GL + + SN Q I
Sbjct: 219 ELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIE 278
Query: 584 D--SGLEKPSALQIELN 628
D SGL+K + E N
Sbjct: 279 DELSGLKKLETVYFEGN 295
>SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 418
Score = 26.2 bits (55), Expect = 3.9
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 179 NDTEQAVIYA---LEAGYTHIDTAYKYGIEDQVG 271
NDT A+ A LEAG THIDT+ GI ++ G
Sbjct: 227 NDTGMAIANAYCALEAGATHIDTSI-LGIGERNG 259
>SPAC3C7.14c |obr1|apt1, uhp1|ubiquitinated histone-like protein
Uhp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 202
Score = 25.8 bits (54), Expect = 5.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 176 TNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRE 313
T +T VIY+ + A K GIE G+A+ +F E L E
Sbjct: 3 TANTVAIVIYSTYGHVVKLAEAEKAGIEKAGGKAVIYQFPETLSPE 48
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 165 TFPLGRCPSHVPSATTGMFPPLLSCNVGTISS 70
+ P R P VPS + PP+ + GT+SS
Sbjct: 235 SIPSSRPPERVPSLSAPAPPPIPPPSNGTVSS 266
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.0 bits (52), Expect = 9.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 463 LTRQRGLSGHVAGYDRRQEARPDQIHRHLQL*PRTNPEDH 582
+T G+S ++GY R HR ++ P PEDH
Sbjct: 175 ITSSNGVSARLSGYAFANSKRNRDFHRIFKVLP---PEDH 211
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,840,290
Number of Sequences: 5004
Number of extensions: 62446
Number of successful extensions: 220
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -