Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a11f
(634 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0070 + 902999-903354,904354-904600,904718-904897,905087-90... 131 5e-31
04_04_0034 + 22298636-22298952,22299057-22299300,22299395-222995... 127 8e-30
10_01_0065 + 845447-846187,846969-847193 125 3e-29
04_04_0033 + 22295974-22296290,22296441-22296684,22296797-222969... 124 8e-29
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 121 4e-28
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 120 1e-27
10_01_0066 + 848523-849269,849520-849741 119 2e-27
05_05_0085 - 22265143-22265226,22265294-22265602,22266915-222671... 119 2e-27
03_02_0297 + 7196624-7196931,7198015-7198258,7198385-7198573,719... 118 3e-27
04_01_0350 - 4610444-4610668,4612181-4612969 117 7e-27
10_01_0069 + 890634-890941,892146-892395,893146-893175,894956-89... 117 9e-27
05_05_0196 + 23152389-23152658,23153042-23153092,23153167-231532... 107 5e-24
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 103 1e-22
02_01_0179 - 1227573-1227803,1227916-1228138,1228159-1228185,122... 100 1e-21
01_06_1337 + 36404245-36404355,36404467-36404517,36405304-364053... 85 3e-17
07_01_0316 + 2226010-2226256,2226956-2227047,2227143-2227180,222... 56 3e-08
10_08_0636 + 19478723-19478869,19479984-19480212,19480321-194804... 48 8e-06
04_03_0439 + 15937934-15938167,15938276-15938476,15938852-159389... 35 0.047
02_05_1228 + 35086576-35087139,35089125-35089268,35090436-350906... 35 0.047
09_06_0325 + 22347286-22347574,22347770-22348054,22348508-223485... 34 0.082
10_08_0021 + 14217455-14217505,14217742-14217909,14219137-142193... 32 0.33
03_05_0299 + 22887603-22887797,22887891-22887986,22888089-228881... 32 0.44
05_05_0084 - 22262007-22262300,22262435-22262707,22263418-222634... 31 0.76
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 0.76
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 30 1.3
12_02_0351 - 17829874-17830005,17830250-17830267,17830544-178306... 30 1.8
11_01_0361 + 2772193-2772334,2773457-2773587,2773872-2773985,277... 30 1.8
07_01_0236 - 1725061-1727070 30 1.8
01_05_0718 - 24575946-24576121,24576721-24576874,24576964-245770... 30 1.8
07_03_1372 + 26104857-26104968,26105055-26105428,26105598-261056... 29 3.1
12_02_0856 + 23708234-23708420,23709364-23709567,23709689-237099... 29 4.1
07_03_0124 - 13723597-13724657,13726179-13726413 29 4.1
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 28 5.4
11_05_0092 + 18984571-18984621,18984717-18984779,18984957-189849... 28 7.1
11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229... 28 7.1
06_03_0859 - 25473784-25473798,25473862-25473923,25474251-254743... 28 7.1
01_01_0426 + 3234987-3235935,3236744-3236782,3237044-3237409,324... 28 7.1
12_02_0587 + 20835741-20836115,20836183-20836218,20836409-208366... 27 9.4
11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977 27 9.4
06_03_1332 - 29403320-29407804 27 9.4
06_01_1088 - 8926361-8927301,8927437-8927705,8927850-8929023,892... 27 9.4
05_06_0065 - 25303143-25303769,25303868-25304758,25305096-253052... 27 9.4
03_01_0319 - 2499470-2499598,2499681-2499746,2499830-2499937,250... 27 9.4
>10_01_0070 +
902999-903354,904354-904600,904718-904897,905087-905332
Length = 342
Score = 131 bits (316), Expect = 5e-31
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 10/198 (5%)
Frame = +2
Query: 65 SAELIVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAY 244
+A +P L SG +P+V +GT P Q+ AV+ A++AGY H DTA
Sbjct: 11 AAAATIPEAALRSGKPMPLVGMGT--ASFPLD-APQLPATVRDAVLRAIDAGYRHFDTAA 67
Query: 245 KYGIEDQVGRALTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVD 418
YG E +G A+ + G+ R+ ++IT+KLW S +V+PALR++L NL + Y+D
Sbjct: 68 AYGTEAPLGEAVLEAVRAGMVASRDDLYITSKLWISDTHPGRVLPALRRTLRNLQMVYID 127
Query: 419 LYLIHWPIAM-FENDT---LLDN----VDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQ 574
LYLIHWPI + E +T + DN +D W+ M + ++LGLTK+IG+SNF +++
Sbjct: 128 LYLIHWPIRLRVEQETPSPVYDNDFVMMDMEGVWKDMEECQRLGLTKAIGVSNFTCKKLN 187
Query: 575 RIIDSGLEKPSALQIELN 628
++ P+A Q+E+N
Sbjct: 188 TLLSFATIPPAANQVEIN 205
>04_04_0034 +
22298636-22298952,22299057-22299300,22299395-22299574,
22300819-22300842,22301055-22301285
Length = 331
Score = 127 bits (306), Expect = 8e-30
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 9/192 (4%)
Frame = +2
Query: 80 VPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIE 259
VP + L G P+ A+G +G T A + ALE G+ H DTA YG E
Sbjct: 4 VPEVALRHGAGRPMPAVG--VGTADSAATSPETK--RGAALAALEVGFRHFDTAALYGTE 59
Query: 260 DQVGRALTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 433
+G A+ + GL RE +F+TTKLW + V+P+LR+SL NL +EYVDLYL+H
Sbjct: 60 APLGEAIAEATRRGLVASREEVFVTTKLWCTQCHPGLVLPSLRESLRNLQMEYVDLYLVH 119
Query: 434 WPIAMFENDTLL-----DNV--DFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSG 592
WPI++ +L D V DF WR M + +LGL K+IG+SNF + + +++
Sbjct: 120 WPISVKPGPPMLPVKREDAVPFDFEGVWRAMEECHRLGLAKAIGVSNFTTKHLDKLLAVA 179
Query: 593 LEKPSALQIELN 628
P+ Q+E+N
Sbjct: 180 TIPPAVNQVEMN 191
>10_01_0065 + 845447-846187,846969-847193
Length = 321
Score = 125 bits (301), Expect = 3e-29
Identities = 58/161 (36%), Positives = 98/161 (60%), Gaps = 10/161 (6%)
Frame = +2
Query: 176 TNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGL--KRESIFITTKLWNSY 349
+ DT A++ A+E GY H DTA Y E VG A+ + GL R +F+T+K+W S
Sbjct: 31 SEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSD 90
Query: 350 HEREQVIPALRKSLENLNLEYVDLYLIHWPIAM--------FENDTLLDNVDFLDTWRGM 505
+V+PA R++L NL ++YVDL L+HWP+++ F + +L + D WRGM
Sbjct: 91 LHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGM 150
Query: 506 IDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
+ +LGL ++IG+SNF+ +++++++ +P+ Q+E+N
Sbjct: 151 EECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVN 191
>04_04_0033 +
22295974-22296290,22296441-22296684,22296797-22296976,
22297749-22297979
Length = 323
Score = 124 bits (298), Expect = 8e-29
Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Frame = +2
Query: 74 LIVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYG 253
++VP L G P+ A+G + P T AV+ ALEAG+ H DTA Y
Sbjct: 3 VVVPEAVLRHGDARPMPAVGMGVAEYPS-----TPERTRDAVLAALEAGFRHFDTASLYR 57
Query: 254 IEDQVGRALTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYL 427
E +G A+ + GL RE F+TTKLW + + V+P+LR+SL NL +EYVDLYL
Sbjct: 58 TEAPLGEAIAEATRRGLLASREEAFVTTKLWCTQCHPDLVLPSLRESLRNLQMEYVDLYL 117
Query: 428 IHWPIAMFENDTLL----DNV---DFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIID 586
IH PI++ + ++V DF WR M + +LGL K+IG+SNF + I +++
Sbjct: 118 IHLPISVKPGPMVFPVKKEDVVPFDFGGVWRAMEECHRLGLAKAIGVSNFTTKHIDKLLA 177
Query: 587 SGLEKPSALQIELN 628
P+ Q+E+N
Sbjct: 178 VATILPAVNQVEMN 191
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 121 bits (292), Expect = 4e-28
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 11/193 (5%)
Frame = +2
Query: 83 PTLQLSSGGN-IPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIE 259
P L GG +P V LGT R G+ A++ ALE GY HIDTA YG E
Sbjct: 17 PAGPLGGGGRAVPAVGLGT-ASLRSVGE-----ESFRGALLAALEVGYRHIDTASVYGSE 70
Query: 260 DQVGRALTKKFSEGLK--RESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 433
VG A+ G+ RE +F+TTK+W + + V+P+LR+SL+NL +EYVD+YL+H
Sbjct: 71 RVVGEAVAGAARRGVIACREEVFVTTKVWCTQCHPDLVLPSLRESLQNLQMEYVDMYLVH 130
Query: 434 WPIAM--------FENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDS 589
WP+++ + + ++ +D W+ M + +LGL K IG+SNF +++Q ++
Sbjct: 131 WPMSVKPTKPHYPMKREDIMP-MDLRGVWQAMEECHQLGLAKMIGVSNFTTKKLQELLAF 189
Query: 590 GLEKPSALQIELN 628
P+ Q+ELN
Sbjct: 190 AKIPPAVNQVELN 202
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 120 bits (289), Expect = 1e-27
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 6/182 (3%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L++G IP V LGTW G V D AV A++AGY HID A Y E++VG
Sbjct: 7 LNTGAKIPSVGLGTW--QSDPG----VVGD---AVYAAVKAGYRHIDCARMYKNENEVGI 57
Query: 275 ALTKKFSEGL-KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMF 451
AL K F EG+ KRE +FIT+KLW H E V +L K+L +L LEY+DLYLIHWP +
Sbjct: 58 ALKKLFEEGVVKREDLFITSKLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHWPFRVK 117
Query: 452 ENDTLLDNVDFL-----DTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQ 616
+ + + D++ TW M G +++IG+SNF+ +++ ++ P+ Q
Sbjct: 118 KGSGISNTEDYIPPDIPSTWGAMEKLYDSGKSRAIGVSNFSSKKLGDLLAVACVPPAVDQ 177
Query: 617 IE 622
+E
Sbjct: 178 VE 179
>10_01_0066 + 848523-849269,849520-849741
Length = 322
Score = 119 bits (286), Expect = 2e-27
Identities = 57/161 (35%), Positives = 95/161 (59%), Gaps = 10/161 (6%)
Frame = +2
Query: 176 TNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGL--KRESIFITTKLWNSY 349
+ +T A++ A+E GY H DTA Y E V A+ + GL R +F+T+KLW S
Sbjct: 33 SEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSD 92
Query: 350 HEREQVIPALRKSLENLNLEYVDLYLIHWPIAM--------FENDTLLDNVDFLDTWRGM 505
+V+PA R++L NL ++YVDL L+HWP + F + + D WRGM
Sbjct: 93 LHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGM 152
Query: 506 IDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
+ +LGL ++IG+SNF+ +++++++ + +P+A Q+E+N
Sbjct: 153 EECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMN 193
>05_05_0085 -
22265143-22265226,22265294-22265602,22266915-22267187,
22267413-22267500,22267620-22267696,22267791-22267841,
22267967-22268077
Length = 330
Score = 119 bits (286), Expect = 2e-27
Identities = 73/182 (40%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L++G IP V LGTW G V AV A++AGY HID A Y E ++G
Sbjct: 7 LNTGAKIPSVGLGTWQAE--PGVV-------GNAVYAAVKAGYRHIDCAQAYFNEKEIGV 57
Query: 275 ALTKKFSEGL-KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM- 448
AL K F EG+ KRE IFIT+KLW + H E V AL +L++L +YVDLYLIHWP+ M
Sbjct: 58 ALKKVFDEGIVKREDIFITSKLWCTNHAPEDVPVALDSTLQDLQTDYVDLYLIHWPVRMK 117
Query: 449 ----FENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQ 616
F +L D TW M G ++IG+SNF+ ++++ ++ P+ Q
Sbjct: 118 KGAGFGGQNVLP-TDIPATWAAMEKLHDSGKARAIGVSNFSSKKLEDLLAVARVPPAVDQ 176
Query: 617 IE 622
+E
Sbjct: 177 VE 178
>03_02_0297 +
7196624-7196931,7198015-7198258,7198385-7198573,
7198650-7198874
Length = 321
Score = 118 bits (285), Expect = 3e-27
Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 11/187 (5%)
Frame = +2
Query: 101 SGGNIPVVALGTWL-GHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRA 277
+G +P V +GT + G RP+ +AV+ A+EAGY H DTA Y E +G A
Sbjct: 11 AGFGMPRVGMGTAVQGPRPE--------PIRRAVLKAIEAGYRHFDTAAHYETEAPIGEA 62
Query: 278 LTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM- 448
+ G R +FIT+KLW S R++V+PALR++L NL +EYVDLYL+HWP++M
Sbjct: 63 AAEAVRSGAIASRADLFITSKLWCSDAHRDRVLPALRQTLWNLQMEYVDLYLVHWPVSMK 122
Query: 449 -------FENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPS 607
F D + D W M + +LGL K+IG+ NF+ +++ ++ P+
Sbjct: 123 PGRYKAPFTADDFVP-FDMRAVWEAMEECHRLGLAKAIGVCNFSCKKLDTLLSFATIPPA 181
Query: 608 ALQIELN 628
Q+E+N
Sbjct: 182 VNQVEVN 188
>04_01_0350 - 4610444-4610668,4612181-4612969
Length = 337
Score = 117 bits (282), Expect = 7e-27
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 13/202 (6%)
Frame = +2
Query: 65 SAELIVPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAY 244
+A VP + L+SG +PV+ GT P D + +A+ GY H+DTA
Sbjct: 15 AAATAVPCVTLNSGHAMPVLGFGTGSSTPPA--------DLAATIAHAVRLGYRHLDTAA 66
Query: 245 KYGIEDQVGRALTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVD 418
YG E VG A+ + G R +F+TTKL + +V+ ALR+SL L L+YVD
Sbjct: 67 VYGTEGAVGAAVAEAVRCGAVASRGELFVTTKLSMADAHPPRVVAALRESLSRLGLDYVD 126
Query: 419 LYLIHWPIAMFENDTL-----------LDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQE 565
L+LIHWP+A+ + D L D WRGM + +LGL +SIG+SNF+
Sbjct: 127 LFLIHWPVAIGKKDAAGELTWDDLSRGLVPFDMEGVWRGMEECHRLGLARSIGVSNFSAA 186
Query: 566 QIQRIIDSGLEKPSALQIELNL 631
++ R++ P+ Q+E+N+
Sbjct: 187 KMSRLLALAAVPPAVNQVEMNV 208
>10_01_0069 +
890634-890941,892146-892395,893146-893175,894956-895135,
895418-895669
Length = 339
Score = 117 bits (281), Expect = 9e-27
Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 12/196 (6%)
Frame = +2
Query: 80 VPTLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIE 259
+P LSSG +P V +GT P G T + V+ A+EAGY H DTA Y E
Sbjct: 1 MPEAALSSGKPMPRVGMGT--ASFPLGATDPST--VKDVVLRAIEAGYRHFDTAAVYQTE 56
Query: 260 DQVGRALTKKFSEGL--KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIH 433
+G A+ + GL R+ ++IT+KLW ++ V+P+LR++L + +EY+DLYLIH
Sbjct: 57 AILGDAVAEAVRAGLVASRDELYITSKLWVAHAHPGHVLPSLRRALRKMQMEYLDLYLIH 116
Query: 434 WPIAM----------FENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRII 583
+P++M + D L+ +D W+ M + ++LGLTK+IG+SNF+ ++++ ++
Sbjct: 117 FPVSMRLAEDPESMTYSKDDLV-MMDMEGVWKEMEECQRLGLTKAIGVSNFSCKKLETLL 175
Query: 584 DSGLEKPSALQIELNL 631
P+A Q+++ L
Sbjct: 176 SFATISPAANQLKVRL 191
>05_05_0196 +
23152389-23152658,23153042-23153092,23153167-23153240,
23153356-23153443,23153541-23153738,23153824-23153895,
23154034-23154093,23154194-23154370,23154975-23155064
Length = 359
Score = 107 bits (258), Expect = 5e-24
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 7/144 (4%)
Frame = +2
Query: 197 VIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHEREQVIPA 376
++ L+AGY H+DTA +YGIE +VG+ L G+ R+ +F+T+K+W + E+V PA
Sbjct: 85 IVNHLQAGYRHVDTAAQYGIEQEVGKGLKAAMEAGINRKDLFVTSKIWCTNLAPERVRPA 144
Query: 377 LRKSLENLNLEYVDLYLIHWPIAMF-------ENDTLLDNVDFLDTWRGMIDAKKLGLTK 535
L+ +L++L L+Y+DLYLIHWP + E +L+ D WR M GL K
Sbjct: 145 LKNTLKDLQLDYIDLYLIHWPFRLKDGAHQPPEAGEVLE-FDMEAVWREMERLVTDGLVK 203
Query: 536 SIGISNFNQEQIQRIIDSGLEKPS 607
IG+ NF+ ++ R++ S P+
Sbjct: 204 DIGVCNFSVTKLNRLLQSANIPPA 227
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 103 bits (247), Expect = 1e-22
Identities = 70/182 (38%), Positives = 100/182 (54%), Gaps = 6/182 (3%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQV-G 271
L++G IP V LGT+ G V V V A++AGY HID A Y E +V G
Sbjct: 7 LNTGARIPSVGLGTYKAGT--GVVADV-------VSAAVKAGYRHIDCAPLYKNEQEVIG 57
Query: 272 RALTKKFSEGL-KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAM 448
AL K F +G+ KRE +FIT+K+W S E V A+ +L++L L+YVDLYLIHWP +
Sbjct: 58 GALKKLFDDGVVKREDLFITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQI 117
Query: 449 FENDTLL-DNV---DFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQ 616
+ L +N D TWR M G ++IG+SNF+ +++ ++ P+ Q
Sbjct: 118 KKGTELSPENFVKPDIPSTWRAMEQLYDSGKARAIGVSNFSSKKLGDLLCVARVPPAVDQ 177
Query: 617 IE 622
+E
Sbjct: 178 VE 179
>02_01_0179 -
1227573-1227803,1227916-1228138,1228159-1228185,
1228519-1228651,1228748-1228865,1229357-1229451,
1229886-1230048
Length = 329
Score = 100 bits (239), Expect = 1e-21
Identities = 68/168 (40%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +2
Query: 89 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQV 268
L LSSG +P V LG W P + AL GY H D A Y E +V
Sbjct: 13 LALSSGHTMPSVGLGVWRMDSPA---------IRDLIHSALRIGYRHFDCAADYQNEAEV 63
Query: 269 GRALTKKFSEGL-KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 445
G AL + F GL KRE +FITTKLWNS H V+ A + SL+ L L+Y+DLYLIH+P+A
Sbjct: 64 GDALAEAFQTGLVKREDLFITTKLWNSDHGH--VVEACKDSLKKLRLDYLDLYLIHFPVA 121
Query: 446 -----------MFENDTLLD---NVDFLDTWRGMIDAKKLGLTKSIGI 547
+D +LD + TW M D +GL +SIGI
Sbjct: 122 TRHTGVGTTASALGDDGVLDIDTTISLETTWHAMEDLVSMGLVRSIGI 169
>01_06_1337 +
36404245-36404355,36404467-36404517,36405304-36405337,
36405428-36405485,36405499-36405586,36406110-36406385,
36406505-36406753,36407558-36407641
Length = 316
Score = 85.4 bits (202), Expect = 3e-17
Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L++G IP V LGTW G V AV A++AGY HID A Y E +VG
Sbjct: 7 LNTGAKIPSVGLGTW--QSDPGVV-------GNAVYAAVKAGYRHIDCASAYNNEKEVGL 57
Query: 275 ALTKKFSEGLKRESIFITTKLWN------SYHEREQVIPALRKSLENLNLEYVDLYLIHW 436
AL K F E + L +H E V AL +L +L LEY+DLYLIHW
Sbjct: 58 ALKKLFEEVELEFQCLLGALLQLIRGDGCDHHAPEDVPEALDATLNDLQLEYLDLYLIHW 117
Query: 437 PIAMFENDTLLDNVDFL-----DTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEK 601
P + ++ +L TW M G +++IG+SNF+ +++ ++ +
Sbjct: 118 PFRTKKGSSIGKPESYLPPDIPSTWAAMEKLYDSGKSRAIGVSNFSSKKLGDLLAAARVP 177
Query: 602 PSALQIE 622
P+ Q+E
Sbjct: 178 PAVDQVE 184
>07_01_0316 +
2226010-2226256,2226956-2227047,2227143-2227180,
2227289-2227450,2227540-2227562,2227673-2227744,
2227858-2228025,2228318-2228400,2228533-2228595,
2228735-2228917
Length = 376
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +2
Query: 356 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTK 535
R V+ AL+KSL+ L L V+LY +HWP ++ N+ LD G+ DA + GL K
Sbjct: 154 RGSVLSALKKSLDRLGLSSVELYQLHWP-GLWGNEGYLD---------GLADAYEQGLVK 203
Query: 536 SIGISNFNQEQIQ 574
++G+SN+N+++++
Sbjct: 204 AVGVSNYNEKRLR 216
>10_08_0636 +
19478723-19478869,19479984-19480212,19480321-19480414,
19480598-19480721,19480922-19481023,19481103-19481254,
19481353-19481446,19481642-19481827
Length = 375
Score = 47.6 bits (108), Expect = 8e-06
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Frame = +2
Query: 110 NIPVVALGTWLGHRPKGKVVQVTNDTEQAVIY--ALEAGYTHIDTAYKYG---IEDQVGR 274
++ + GTW Q + DTE + AL+ G DTA YG + Q R
Sbjct: 56 SVSPMGFGTWAWGNQLLWGYQESMDTELQECFNLALKNGINLFDTADSYGTGRLNGQSER 115
Query: 275 ALTK---KFSEGLKR-ESIFITTKLWNSYHER---EQVIPALRKSLENLNLEYVDLYLIH 433
L K ++ +K + + I TK + +Y R Q + A + SLE L L+ + + +H
Sbjct: 116 LLGKFIREYEGPMKSPDDVIIATK-FAAYPWRLTSGQFVSACKSSLERLQLDRLGIGQLH 174
Query: 434 WPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRI 580
W A + L + W G+++ + GL +++G+SN+ +Q+ +I
Sbjct: 175 WSTANYA--PLQERA----LWDGLVEMYEKGLVRAVGVSNYGPKQLLKI 217
>04_03_0439 +
15937934-15938167,15938276-15938476,15938852-15938911,
15939896-15939958,15940822-15940848,15941020-15941358
Length = 307
Score = 35.1 bits (77), Expect = 0.047
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Frame = +2
Query: 182 DTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHERE 361
D + +A+ AG TH+DT+ YG L K +G RE + + TK S+ + +
Sbjct: 45 DMVALIHHAVAAGVTHLDTSDMYG--PHTNELLLGKALQGGVREKVEVATKFAVSFADGK 102
Query: 362 --------QVIPALRKSLENLNLEYVDLYLIH 433
V A SL L ++ VDLY H
Sbjct: 103 VEIRGDPAYVRAACEGSLRRLGVDCVDLYYQH 134
>02_05_1228 +
35086576-35087139,35089125-35089268,35090436-35090600,
35090722-35090796,35091468-35091671
Length = 383
Score = 35.1 bits (77), Expect = 0.047
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Frame = +2
Query: 212 EAGYTHIDTAYKYG---IEDQVGRALTKKFSEGLKRESIFITTKL-WNSYH------ERE 361
+AG D A Y E+ +G+A+ G +R + ++TKL W R+
Sbjct: 42 DAGVNFFDNAEVYANGRAEEIMGQAMRDL---GWRRSDVVVSTKLFWGGQGPNDKGLSRK 98
Query: 362 QVIPALRKSLENLNLEYVDLYLIHWPIA 445
++ LR SL+ L+++YVD+ H P A
Sbjct: 99 HIVEGLRGSLKRLDMDYVDVVYCHRPDA 126
>09_06_0325 +
22347286-22347574,22347770-22348054,22348508-22348592,
22348686-22348802,22349270-22349334,22349456-22349544,
22349642-22349721,22349797-22349908,22349990-22350109,
22350234-22350416
Length = 474
Score = 34.3 bits (75), Expect = 0.082
Identities = 18/80 (22%), Positives = 42/80 (52%)
Frame = +2
Query: 356 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTK 535
R V + +S + +++ +D+ HW N +LD + + D K+ G K
Sbjct: 233 RSYVEDNINRSRKRMDVSALDMLQFHW--------WDYANPGYLDALKHITDLKEEGKIK 284
Query: 536 SIGISNFNQEQIQRIIDSGL 595
++ ++NF+ +++Q I+++G+
Sbjct: 285 TVALTNFDTDRLQIILENGI 304
>10_08_0021 +
14217455-14217505,14217742-14217909,14219137-14219340,
14219429-14219601,14219970-14220066,14220183-14220336,
14222029-14222209,14222858-14222898,14223146-14223231,
14223282-14223389,14223538-14223579
Length = 434
Score = 32.3 bits (70), Expect = 0.33
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Frame = +2
Query: 206 ALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHER--------- 358
A EAG T DT+ YG L K + L RE + + TK + +
Sbjct: 48 AFEAGVTFFDTSDAYG--PHTNEVLLGKALKQLPREKVQVATKFGIAGFDANGMLVKGTP 105
Query: 359 EQVIPALRKSLENLNLEYVDLYLIH 433
+ V SLE L ++Y+DLY H
Sbjct: 106 DYVRACCEASLERLAVDYIDLYYQH 130
>03_05_0299 +
22887603-22887797,22887891-22887986,22888089-22888172,
22888573-22888733,22889458-22889575,22889914-22890049,
22890351-22890529,22890690-22890929
Length = 402
Score = 31.9 bits (69), Expect = 0.44
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 20/99 (20%)
Frame = +2
Query: 203 YALEAGYTHIDTAYKYGI---EDQVGRA--LTKKFSEGLKRESIFITTKLWNSYHEREQV 367
Y+ + G +DTA Y + ++ GR + + R+ I + TK+ + Y ER
Sbjct: 83 YSFDQGVNILDTAEMYPVPPRKETQGRTDLYIGSWMQSKPRDKIILATKV-SGYSERSTF 141
Query: 368 I---------------PALRKSLENLNLEYVDLYLIHWP 439
+ ++ KSL L+ +Y+DL IHWP
Sbjct: 142 LRDNAKVVRVDAANIKESVEKSLSRLSTDYIDLLQIHWP 180
>05_05_0084 -
22262007-22262300,22262435-22262707,22263418-22263468,
22263944-22264035,22264715-22264724
Length = 239
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = +2
Query: 479 DFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIE 622
D TW+ M G ++IG+SNF+ ++++ +++ P+ Q+E
Sbjct: 73 DIPATWQAMEKLYDSGKARAIGVSNFSCKKLEDLLNVARVPPAVNQVE 120
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 305 KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLY 424
K E++ T +L N E+ Q I L++++ENL D+Y
Sbjct: 784 KNEAVASTVELGNKLEEQNQQISNLQEAVENLEAAKTDMY 823
>11_04_0364 -
16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +2
Query: 323 ITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWR 499
I ++LW+ R +V+P+L S +N+ + Y+ + I+++ D + D L W+
Sbjct: 364 IESELWDLEQPRNEVLPSLELSYKNMPI-YLKRCFV--AISLYPKDYIFDRNQVLQLWK 419
>12_02_0351 -
17829874-17830005,17830250-17830267,17830544-17830672,
17831037-17831336,17831447-17831675,17831762-17831989,
17832380-17832645
Length = 433
Score = 29.9 bits (64), Expect = 1.8
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Frame = +2
Query: 143 GHRPKGKVV-QVTNDTEQAVIY-ALEAGYTHIDTAYKYG---IEDQVGRALTKKFSEGLK 307
G P G V V D +A + AL+ G DT+ YG E +G L + G+
Sbjct: 130 GASPLGHVFGDVPRDVARAAVRRALDLGINFFDTSPYYGGTVSESVLGDCLR---AAGVP 186
Query: 308 RESIFITTKLWNSYHE-----REQVIPALRKSLENLNLEYVDLYLIH 433
R+ + TK Y E +V ++ +SL L L+YVD+ H
Sbjct: 187 RDRFVVATKC-GRYREGFDFSAARVTRSVDESLARLGLDYVDILHCH 232
>11_01_0361 +
2772193-2772334,2773457-2773587,2773872-2773985,
2774303-2774459,2774577-2775000,2775238-2776030,
2776182-2776241,2776952-2777593
Length = 820
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -2
Query: 315 DSLFSPSENFLVRALPTWSSIPYLY-AVSMCVYPASNAYMTACSVSLVT*TTFPLGRCPS 139
DSL PS F+ +P ++IPY Y A+ +Y A+M C + + T C S
Sbjct: 407 DSLTHPSYGFIPVPIPVGAAIPYHYGAIMQPMYYPQGAFM-HCDSAAINKTAIQHVSCQS 465
Query: 138 H 136
+
Sbjct: 466 N 466
>07_01_0236 - 1725061-1727070
Length = 669
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +2
Query: 371 PALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMID----AKKLGL--T 532
P ++ ++ + VDL L+HW N++L+D VD ID A KLGL +
Sbjct: 553 PIMQSEEQDCPIMLVDLVLLHW-----RNESLIDVVDKRLQNEYNIDEACLALKLGLLCS 607
Query: 533 KSIGISNFNQEQIQRIIDSGLEKPSALQIEL 625
S+ + N Q+ + +D + P + +L
Sbjct: 608 HSLPSARPNMRQVMQFLDGDISFPDEVLAQL 638
>01_05_0718 -
24575946-24576121,24576721-24576874,24576964-24577060,
24577142-24577314,24577426-24577629,24577725-24577892,
24577938-24578084
Length = 372
Score = 29.9 bits (64), Expect = 1.8
Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Frame = +2
Query: 179 NDTEQAVI-YALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLW----- 340
+D AVI +A G T DT+ YG L K + L RE + + TK
Sbjct: 70 DDAGAAVIAHAFRRGVTFFDTSDVYG--PLANEILLGKALKQLPREQVQVATKFGIRRGA 127
Query: 341 ---NSYHEREQVIPAL-RKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMI 508
+ R + + A SL L ++Y+DLY H DT + D + + ++
Sbjct: 128 DGVRAVCGRPEYVRACCEASLGRLGVDYIDLYYQH------RVDTTIPIEDTIGELKKLV 181
Query: 509 DAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELNL 631
+ G + IG+S + + I+R + +A+Q+E +L
Sbjct: 182 EE---GKVRYIGLSEASPDTIRRA--HAVHPITAVQMEWSL 217
>07_03_1372 +
26104857-26104968,26105055-26105428,26105598-26105696,
26107160-26107222,26107546-26107815,26108158-26108278,
26108386-26108522,26108614-26108727,26108799-26108998,
26109094-26109285,26109378-26109543
Length = 615
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 429 IKYRSTYSRLRFSRDFLSAGITCSLSW*EFQSLVVIKIDSLFSPSENFLVRALP 268
IKY + SR F L G+ C + Q + D+ F P NFL+R +P
Sbjct: 233 IKYVTRSSRKGFKAGALKKGMECDYTK---QCEYIAIFDADFQPEPNFLLRTVP 283
>12_02_0856 +
23708234-23708420,23709364-23709567,23709689-23709918,
23710174-23710174,23710268-23710788
Length = 380
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 202 IRVGSWIHTHRHRVQIWNRGPSGKGPDQEILRRTKKRIYLYNYQALEFLPRERASDPSAE 381
+++ + HT R +I+ G D E LR R +YNY+A+ P + P AE
Sbjct: 158 LKISGYRHTQPGRAKIF--GFFAVRDDLEPLRNYVFRHAIYNYEAVSVKP--KTDSPEAE 213
Query: 382 EVP 390
+ P
Sbjct: 214 DEP 216
>07_03_0124 - 13723597-13724657,13726179-13726413
Length = 431
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +2
Query: 308 RESIFITTKLWNSYHEREQVIPALRKSLENLNL---EYVDLYLIHWPIAMFENDTLLDNV 478
+E++ + + WN H R + LRK NL E Y + W + F +L
Sbjct: 187 KETLPSSHRNWNICHVRTSLSDNLRKQFSNLRTAISEEQIFYPLMWIMTSFAVVPILSGT 246
Query: 479 DF-LDTWRGMIDAKKLGLTKSIG 544
F T +D +GL+K +G
Sbjct: 247 MFCFQTQYLKLDPSVIGLSKVVG 269
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 320 FITTKLWNSYHEREQVIPALRKSLENL--NLEYVDLYLIHWPIAMF 451
F LW+ Y+ REQ++ L ++ L L+ V++ L+ + +F
Sbjct: 522 FAVVMLWHKYNGREQLLGVLEDAISKLEETLQSVNIVLLKFRAVLF 567
>11_05_0092 +
18984571-18984621,18984717-18984779,18984957-18984998,
18985560-18985625,18985728-18985793,18986277-18986390,
18986592-18986655,18987399-18987481,18987703-18987752,
18987844-18987921,18988020-18988148,18988244-18988286,
18988987-18989073,18989217-18989318,18989556-18989663,
18989750-18989800,18989886-18989959,18990079-18990130,
18990216-18990311
Length = 472
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 561 WLKLEMPMDLVRPSFLASIIPRHVSRKSTLSS---KVSFSNIAM 439
WL+++ P DL S L +IP R L S KV NI +
Sbjct: 29 WLQMQSPSDLDLKSQLQELIPEQQDRLKKLKSEHGKVQLGNITV 72
>11_04_0365 -
16818468-16818514,16818619-16821706,16822860-16822919,
16823595-16823954
Length = 1184
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/63 (23%), Positives = 31/63 (49%)
Frame = +2
Query: 323 ITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRG 502
+ ++LW+ +++PAL S +N+ + L L + +F D L + + W G
Sbjct: 433 LESELWDLDKAHNEILPALELSYKNMPMH---LKLCFVSLCLFPKDYSLKKSEVISLW-G 488
Query: 503 MID 511
++D
Sbjct: 489 LLD 491
>06_03_0859 -
25473784-25473798,25473862-25473923,25474251-25474345,
25475718-25475831,25476490-25476695,25476834-25476959,
25479516-25480178
Length = 426
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 278 GPFPLGPRFHICTRCLCVCIQLPTR 204
G PLG RFH RC+ +QL R
Sbjct: 226 GHQPLGARFHDAARCIFTSVQLYER 250
>01_01_0426 +
3234987-3235935,3236744-3236782,3237044-3237409,
3240871-3242315
Length = 932
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGR 274
L +G N V + WLG P +V+ + ++ I L++GY + D + I D
Sbjct: 785 LDAGNNQIVDSFPFWLGKLPNLRVLVLRSNKINGTIRGLKSGYQNSDYFTRLQIIDLASN 844
Query: 275 ALT 283
L+
Sbjct: 845 HLS 847
>12_02_0587 +
20835741-20836115,20836183-20836218,20836409-20836617,
20837402-20837498,20837977-20838046,20838224-20838281,
20838914-20839734,20839780-20840121,20840224-20841227
Length = 1003
Score = 27.5 bits (58), Expect = 9.4
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Frame = -1
Query: 286 LGQGPSHLVLDSIFVRGVYVCVSSFQRV------YDSLLCVIGYLNYFSFRSMSQPCSEC 125
+G+G S +V + I G + V Q + + S L VIG + + + M CSEC
Sbjct: 722 IGRGGSGVVYEGILDDGKKIAVKKLQDMVQGELDFQSELSVIGRIYHMNLVRMWGFCSEC 781
Query: 124 YH 119
H
Sbjct: 782 GH 783
>11_03_0001 - 8844030-8845061,8845392-8845912,8845962-8845977
Length = 522
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 241 VQIWNRGPSGKGPDQEILRRTKKRIYLYNYQALEFLPRERASDPSAEE 384
V W +G GP +++ T +YN Q+++F E +SD E+
Sbjct: 85 VTTWYKGDVPPGPKVQLVTSTAAEFSIYNLQSVKFQFME-SSDGGGEQ 131
>06_03_1332 - 29403320-29407804
Length = 1494
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +2
Query: 323 ITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRG 502
+ +K W S ++PAL+ S + L+ + A+F D D+ + + W G
Sbjct: 503 LESKEWESQTSENDIMPALKLSYDYLSFHLQQCFTY---CALFPEDYKFDSEEMIHLWIG 559
>06_01_1088 -
8926361-8927301,8927437-8927705,8927850-8929023,
8929132-8929399
Length = 883
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = +2
Query: 329 TKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTW--RG 502
++LW H +++PAL+ S L E + MF D + + +D W G
Sbjct: 409 SELWELPHRENEILPALQLSYLYLPQELKRCFAF---CCMFPKDYSFERDEIVDIWVAEG 465
Query: 503 MIDAKKLGLTKSIGISNFNQEQI 571
+ + + +GI + N+ ++
Sbjct: 466 FVVSSGSTRLEDMGIRSRNERRM 488
>05_06_0065 -
25303143-25303769,25303868-25304758,25305096-25305202,
25305518-25305629
Length = 578
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 318 IDSLFSPSENFLVRALPTWSSIP 250
+ S+ SPSE++L RALP+ SS P
Sbjct: 508 LPSMKSPSESWLSRALPSVSSNP 530
>03_01_0319 -
2499470-2499598,2499681-2499746,2499830-2499937,
2500125-2500259,2500763-2500840,2500994-2501044,
2501805-2501879,2501975-2502037,2503048-2503137,
2503215-2503406,2503498-2503591,2503776-2504279,
2504415-2504614,2504712-2504756,2505023-2505082,
2505476-2505520,2505858-2505941,2506121-2506318,
2506960-2507667
Length = 974
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 184 HRASCHIRVGSWIHTHRHRVQIWNRGPSGKGPDQEILRRTKKRIYLYNYQALEFLPRE 357
H+A H+R GS+ + + W GP G G E R + N++A+ R+
Sbjct: 171 HQAR-HVRTGSFQRFRQQMQRAWKWGPIGSGGGGERSPREQLLRTTVNFEAMAHQKRQ 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,740,634
Number of Sequences: 37544
Number of extensions: 411760
Number of successful extensions: 1328
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -