Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a11f
(634 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 113 1e-25
SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0) 95 6e-20
SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1) 53 2e-07
SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16) 33 0.25
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_11852| Best HMM Match : fn3 (HMM E-Value=1.2e-24) 30 1.4
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 30 1.8
SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35) 29 2.4
SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_29519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_35202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_34622| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 129 bits (311), Expect = 2e-30
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Frame = +2
Query: 86 TLQLSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQ 265
T++L++G +PV+ LGTW K K QV N AV +A++ GY HID AY Y E +
Sbjct: 3 TVKLNNGLEMPVLGLGTW-----KSKPGQVEN----AVKFAIKEGYRHIDCAYAYRNEKE 53
Query: 266 VGRALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 445
VG AL + ++R+ +FIT+KLWN+ H + V SL++L L+Y+DLYLIHWP++
Sbjct: 54 VGDALRELLGSVVERKDLFITSKLWNTKHNPKDVRSNCVDSLKDLGLDYLDLYLIHWPLS 113
Query: 446 MFENDTLL-----DNV-----DFLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGL 595
+ D NV D DTW+ M GL K+IG+SNFN +Q+ I
Sbjct: 114 FRDGDEFFPKDEQGNVLYAYHDPCDTWKAMEKLVDEGLVKAIGLSNFNSKQVDDICAIAR 173
Query: 596 EKPSALQIE 622
KP A Q+E
Sbjct: 174 IKPVANQVE 182
>SB_7528| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 407
Score = 113 bits (272), Expect = 1e-25
Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 11/156 (7%)
Frame = +2
Query: 194 AVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEG-LKRESIFITTKLWNSYHEREQVI 370
AV A+E GY HID A YG E ++G AL++ +EG +KRE +F+T+KLW H + V+
Sbjct: 70 AVRLAIELGYRHIDCAEIYGNEGEIGEALSEVLTEGKVKREELFVTSKLWCDSHHPDDVL 129
Query: 371 PALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNV----------DFLDTWRGMIDAKK 520
PA + +L+NL L+Y+DLYLIH P+A + L ++ +TW+ M
Sbjct: 130 PACQATLKNLQLDYLDLYLIHIPVAFKKGVRLPHSIAEGIIGYTPEGVQNTWQAMEGLVA 189
Query: 521 LGLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
GL K+IG+SNF+ +++ +++++ P+ Q+EL+
Sbjct: 190 KGLCKAIGVSNFSVKRLNKLLETASIVPACNQVELH 225
>SB_54717| Best HMM Match : Aldo_ket_red (HMM E-Value=0)
Length = 333
Score = 94.7 bits (225), Expect = 6e-20
Identities = 54/148 (36%), Positives = 85/148 (57%)
Frame = +2
Query: 185 TEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHEREQ 364
++QAV++ALE+GY IDTA +Y E VG A+ + R I++ TK++ + H ++
Sbjct: 88 SKQAVLWALESGYRLIDTASRYHNEQSVGEAVR---CSNIPRCEIYVVTKVYFTEHGYKE 144
Query: 365 VIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTKSIG 544
+ A KSL L L YVDLYLIH+P+ + +W+ MID + GL +SIG
Sbjct: 145 TMDAFYKSLTRLGLGYVDLYLIHFPVPS----------GVVGSWQAMIDLRSRGLIRSIG 194
Query: 545 ISNFNQEQIQRIIDSGLEKPSALQIELN 628
+SNFN + ++ + P+ QIE++
Sbjct: 195 VSNFNIQHLEALRQQTGVVPAVNQIEVH 222
>SB_56309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 85.4 bits (202), Expect = 3e-17
Identities = 51/155 (32%), Positives = 84/155 (54%)
Frame = +2
Query: 164 VVQVTNDTEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWN 343
V ++ E ++AL+ GY +DTA Y E +VG A+ K GLKRE I++TTKL
Sbjct: 39 VFRLETGCEDVCLFALKNGYRMLDTADIYQNEKEVGSAVRKS---GLKREDIYVTTKLKP 95
Query: 344 SYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKL 523
S + ++S++ L++ YVDL+LIH P N+ + + ++ K+
Sbjct: 96 SEEGHSNALKYAKESIKKLDIGYVDLFLIHTPRP--------GNI--IAAYDALLTLKEE 145
Query: 524 GLTKSIGISNFNQEQIQRIIDSGLEKPSALQIELN 628
GL +S+G+SNF ++ + +G P+ QIE+N
Sbjct: 146 GLIRSVGVSNFGVHHLEELRKAGCRTPAINQIEIN 180
>SB_8916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 619
Score = 82.2 bits (194), Expect = 3e-16
Identities = 59/181 (32%), Positives = 93/181 (51%), Gaps = 7/181 (3%)
Frame = +2
Query: 95 LSSGGNIPVVALGTWLGHRPKGKVVQVTNDTEQAVIYALEAGYTHIDTAYKYGI-EDQVG 271
L+SG +PV+ GT + DT V ALE GY IDTA Y + E QV
Sbjct: 331 LASGYTMPVMGFGT----------ATLGEDTLSVVKTALETGYRLIDTAQGYPLSEPQVA 380
Query: 272 RALTKKFSEGLKRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIAMF 451
+A+ G+ R+ IFI TKL Y E + ++ SL L+ +Y+DL+LIH
Sbjct: 381 KAIA---DSGIPRKDIFIITKLHPRYLGYEPTLKSVEMSLRALSTDYIDLFLIHSKTC-- 435
Query: 452 ENDTLLDNVD------FLDTWRGMIDAKKLGLTKSIGISNFNQEQIQRIIDSGLEKPSAL 613
+D LL + + ++W+ M + + G +S+G+SNFN +++Q +++ SA+
Sbjct: 436 -DDFLLTCAEGEPRGTWKESWKAMEELHRQGKIRSLGVSNFNVDELQELVNFATVPVSAV 494
Query: 614 Q 616
Q
Sbjct: 495 Q 495
>SB_33699| Best HMM Match : Aldo_ket_red (HMM E-Value=3.1)
Length = 93
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 185 TEQAVIYALEAGYTHIDTAYKYGIEDQVGRALTKKFSEGLKRESIFITTKLWNSYHEREQ 364
T+QAV++ALE GY IDTA Y E +VG AL + + R +++ TK++++ H E+
Sbjct: 24 TKQAVLWALENGYRMIDTAASYNNEKRVGEALRE---SAVPRSEVYLVTKVYHTDHGYEK 80
Query: 365 VIPALRKSLENL 400
+ A +SL L
Sbjct: 81 TMKAYDRSLSAL 92
>SB_56184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/92 (23%), Positives = 48/92 (52%)
Frame = +2
Query: 356 REQVIPALRKSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTK 535
R+ V +++KS++ + ++ +D+ HW + +LD + + + G +
Sbjct: 3 RKVVEASIQKSMKRMAVDKLDMVQFHW--------WDYSDKRYLDALLHLSELQSEGKIQ 54
Query: 536 SIGISNFNQEQIQRIIDSGLEKPSALQIELNL 631
I ++NF+ ++Q I D G+ K S+ QI+ +L
Sbjct: 55 EISLTNFDTNRMQEITDHGI-KISSNQIQFSL 85
>SB_55921| Best HMM Match : Aldo_ket_red (HMM E-Value=0.16)
Length = 195
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 383 KSLENLNLEYVDLYLIHWPIAMFENDTLLDNVDFLDTWRGMIDAKKLGLTKSIGISNFN 559
KSLE L ++ +DLYL+HW E L+ + +D +R ++D G+ G+SN +
Sbjct: 50 KSLERLGIDRIDLYLLHW-----EGRVPLE--ETVDAFRELVDE---GMIARWGVSNLD 98
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 305 KRESIFITTKLWNSYHEREQVIPALRKSLENLNLEYVDLYLIHWPIA 445
K + + T+ H+RE + LR+ LE L EY DL H I+
Sbjct: 871 KVKPLLNVTRQEEELHQREDELRTLREKLEKLETEYTDLEKKHSQIS 917
>SB_11852| Best HMM Match : fn3 (HMM E-Value=1.2e-24)
Length = 691
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/42 (40%), Positives = 20/42 (47%)
Frame = -3
Query: 545 CLWIWSGRASWRRSYPATCPESPRCRVRYRSQT*LWASESNT 420
C+ W G W + TC + R RVR S L ASES T
Sbjct: 324 CVSSWEGWGEWS-TCSRTCGDGVRMRVRMHSPCHLEASESGT 364
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 318 IDSLFSPSENFLVRALPTWSSIPYLYAVSMCVYPASNAYMTACSVSL 178
+ S SPS ++ + L T++ + + +++ YP N T C+ L
Sbjct: 149 VSSSLSPSSSYSLNILITFTKLAIIITINIIYYPTFNLMCTNCNKKL 195
>SB_39919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 89 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTND---TEQAVIYALEAGYTHIDTAYK 247
+ L+ +P + W+GH P G + ND T QAV+ + +G +++ K
Sbjct: 54 ISLTGDAIVPGLYCSGWVGHGPVGVIATTMNDAYATGQAVVEDINSGLLKAESSTK 109
>SB_11891| Best HMM Match : F5_F8_type_C (HMM E-Value=4.7e-35)
Length = 1171
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 339 QSLVVIKIDSLFSPSENFLVRALPTWSSIPYLYAVSMC 226
+S ++ D SE FLVR P W I Y++A+ +C
Sbjct: 572 RSADLVSWDGFLRRSEQFLVRDQPGWHRI-YIFALEVC 608
>SB_4889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 89 LQLSSGGNIPVVALGTWLGHRPKGKVVQVTND---TEQAVI 202
+ L+ G +P + W+GH P G + ND T QAV+
Sbjct: 105 ISLTGGAIVPGLYCSGWVGHGPVGVIATTMNDAYATGQAVV 145
>SB_54030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = -1
Query: 226 CVSSFQRVYDSLLCVIGYLNYFSFRS---MSQPCSECYHWYVPTTTQ 95
CVS +++YDS+L ++ Y++ S ++ + W + TTQ
Sbjct: 386 CVSFTRKMYDSILSIVAYMSTQSSQTSKVKKNAVTRIRTWVIAATTQ 432
>SB_29519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -1
Query: 457 VLKHSYGPVNQIQIDVFQVEIFKGLPQRWDHLLSLVVGIP 338
+L + Y PV Q ++D+F ++ G R+ H L G+P
Sbjct: 3 MLAYVYKPVLQNELDIFCDTVWNGHRVRYQHDSELPKGVP 42
>SB_35202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 27.5 bits (58), Expect = 9.6
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -2
Query: 300 PSENFLVRALPTWSSIPYLYAVS---MCVYPASNAYMTACSVSLVT*TTFPLGRCPSHVP 130
P++ +V A PT SI Y + YP + +TA S L T +P G + P
Sbjct: 147 PTDLSIVTAYPTDLSIVTAYPTDRRIVTAYPTDLSIVTAYSTDLCIVTAYPTGLAITGRP 206
Query: 129 SATTG 115
A G
Sbjct: 207 LARLG 211
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,386,460
Number of Sequences: 59808
Number of extensions: 455632
Number of successful extensions: 1334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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