Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a10f
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.64 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.6  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   4.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.5  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 9/17 (52%), Positives = 15/17 (88%)
 Frame = +1

Query: 325 EKQKPDVSDNEISSKFV 375
           +K+KP++SD+EI +K V
Sbjct: 168 KKEKPEMSDSEIVAKLV 184


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 424 YLAASIESACQDIQYPAIAKICKDNTAQFENYIH 525
           Y    I S C   +      +C+     F+NYIH
Sbjct: 127 YGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIH 160


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 176 YCL*RSFVVQICRLRDKYRRNVL 244
           +C+   ++ Q+C+L + + +N L
Sbjct: 195 FCVVNQYIKQVCKLNNGHYKNFL 217


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 6/23 (26%), Positives = 15/23 (65%)
 Frame = +2

Query: 176 YCL*RSFVVQICRLRDKYRRNVL 244
           +C+   ++ Q+C+L + + +N L
Sbjct: 20  FCVVNQYIKQVCKLNNGHYKNFL 42


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 205 LYNK--GTLETVDKQQTCLSSLRM*FKFNTP 119
           LYN+  G+ + V K +TC       ++FN P
Sbjct: 179 LYNQFPGSSQVVVKDETCQYDTESSYQFNDP 209


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = -3

Query: 205 LYNK--GTLETVDKQQTCLSSLRM*FKFNTP 119
           LYN+  G+ + V K +TC       ++FN P
Sbjct: 199 LYNQFPGSSQVVVKDETCQYDTESSYQFNDP 229


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 48  YQNVKSPLSVTKFTI 4
           YQ VK P  +T F+I
Sbjct: 292 YQEVKKPKKITDFSI 306


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 382 FRGLKDVKDLINEEYLAASIESACQDIQYPA 474
           FRGL D  +     Y  A +E       YP+
Sbjct: 346 FRGLMDCDERFTRAYQVAVLEYKGTQTNYPS 376


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,534
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)