Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a10f
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23528-2|AAK31387.1| 984|Caenorhabditis elegans Calsyntenin/alc... 31 0.62
AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin p... 31 0.62
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 1.9
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 29 3.3
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 29 3.3
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 29 3.3
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 3.3
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 29 3.3
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 29 3.3
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 29 3.3
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 29 3.3
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 29 3.3
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 29 3.3
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 28 5.8
AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical ... 28 5.8
>U23528-2|AAK31387.1| 984|Caenorhabditis elegans
Calsyntenin/alcadein homolog protein1, isoform a
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 286 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 417
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>AY091591-1|AAM00045.1| 984|Caenorhabditis elegans calsyntenin
protein.
Length = 984
Score = 31.1 bits (67), Expect = 0.62
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 286 ECGAVGHCTATVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLIN 417
E GA A W P+V DNE S + LF G+ DV +++
Sbjct: 415 EAGATSDFRAAEWRWSMPEVCDNEWHS-YSLLFNGIDDVNVIVD 457
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical
protein F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -2
Query: 317 VAVQCPTAPHSAPRFRLSHHTCGPLAHS-FG 228
+A+ PT PHSA S H+ G AHS FG
Sbjct: 211 IAISHPTPPHSAKTDTGSRHSSGSSAHSQFG 241
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1541 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1586
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1522 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1567
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1578 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1623
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1541 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1586
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1532 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1577
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1522 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1567
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +1
Query: 397 DVKDLINEEYLAASIESACQDIQYPAIAKICKDNTAQFENYIHHVL 534
++KD EY+ + + +DI+ + K+ TA E+YI H +
Sbjct: 1578 EMKDAYKTEYVDHILNNLLEDIRSLRVEKLTGAETATLEHYICHTV 1623
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical
protein C01G6.5 protein.
Length = 952
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 404 LTSLSPRNSFTNFDDISLSETSGFCFSHTVAVQCPTA 294
L SLS + +D ++S +S F T V CPTA
Sbjct: 347 LVSLSEKAQDVQSNDFTISASSAFTVISTSGVLCPTA 383
>AL132860-3|CAB60514.2| 342|Caenorhabditis elegans Hypothetical
protein Y56A3A.4 protein.
Length = 342
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 316 TVWEKQKPDVSDNEISSKFVKLFRGLKDVKDLINEEYLAASIESACQDIQYPAIAKI 486
++ EK K D +ISS V L +KDV ++++++ I+ AC+ I+ + KI
Sbjct: 227 SIMEKSKLDDLMQQISSTTV-LEENVKDVLVEYADDFVSSLIDKACKMIKNREVKKI 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,014,985
Number of Sequences: 27780
Number of extensions: 298116
Number of successful extensions: 980
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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