Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a10f
         (594 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   0.98 
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.3  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               23   3.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   3.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.2  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.1  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
 Frame = +1

Query: 343 VSDNEI---SSKFVKLFRGLKDVKDLINE 420
           +SD +I   SSK +K F   K +K+++NE
Sbjct: 107 ISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 286 ECGAVGHCTATVWEK 330
           E G +GHCTA+V ++
Sbjct: 310 ERGELGHCTASVMDE 324


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 585 CYTCRRFAHCLGRCVRFENVMYVI 514
           C T ++F+ C+   V+F    Y+I
Sbjct: 111 CLTAQKFSRCVIDYVKFHITQYMI 134


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 352 NEISSKFVKLFRGLKDVKDL 411
           N+I   +V  F+G+ DVKD+
Sbjct: 278 NDILRPYVPEFKGVLDVKDV 297


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 352 NEISSKFVKLFRGLKDVKDL 411
           N+I   +V  F+G+ DVKD+
Sbjct: 193 NDILRPYVPEFKGVLDVKDV 212


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 352 NEISSKFVKLFRGLKDVKDL 411
           N+I   +V  F+G+ DVKD+
Sbjct: 512 NDILRPYVPEFKGVLDVKDV 531


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 582 YTCRRFAHCLGRCVRFEN 529
           Y C R  + LGR  RF N
Sbjct: 245 YNCERLCNRLGRVKRFIN 262


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 235 PSVLVAQTTNLYNKGTLETVDKQQTCLSSLRM*FKFNTPALI 110
           PS+    TT+  ++ T++T+  Q +   +  M ++   PALI
Sbjct: 393 PSLYPMATTSPQSQSTIQTLRPQVSPDRTSPMEYRLYNPALI 434


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 313 PYSVQPRRIQPPALDSRTILVVP*HI 236
           PY+ +   + PP    RT+ VV  H+
Sbjct: 894 PYNQRGTVVSPPPTKRRTMKVVKYHL 919


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 313  PYSVQPRRIQPPALDSRTILVVP*HI 236
            PY+ +   + PP    RT+ VV  H+
Sbjct: 932  PYNQRGTVVSPPPTKRRTMKVVKYHL 957


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 42  FDINRYAIKLEQSYLN 89
           F  N YA+K+ ++Y+N
Sbjct: 536 FAQNLYAMKMNETYIN 551


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,114
Number of Sequences: 438
Number of extensions: 3431
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)