Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a09f
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    60   9e-10
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    31   0.64 
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    31   0.64 
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    31   0.64 
Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    27   7.9  

>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 60.5 bits (140), Expect = 9e-10
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = +2

Query: 287 GMFSGGGSSEXXXXXXXXXXXXTYNQYQGQPAQGPCAWEIKQFLECAQQQHDLSLCDGFN 466
           GMF+GGGSS                Q  G     PC +E +QF++CAQ Q D+SLC+GFN
Sbjct: 86  GMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQ--PCEFEWRQFVDCAQNQSDVSLCNGFN 143

Query: 467 EALRQCK 487
           +  +QCK
Sbjct: 144 DIFKQCK 150


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 103  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 270
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 103  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 270
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 103  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 270
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 31.1 bits (67), Expect = 0.64
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +1

Query: 103  TSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 270
            TS S  + +PA    ++  ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2778 TSLSCGTVAPAT-TAATTTTLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z81506-2|CAB04129.1|  257|Caenorhabditis elegans Hypothetical
           protein F16H6.3 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +1

Query: 100 STSASKESCSPAK*CTSSCGSIDPGYDSSSTSAALA 207
           +T+ ++ SCS +   TS+C S +P  DSSS+ AA A
Sbjct: 198 ATTTTQASCSSSGGSTSTCTSYNP--DSSSSCAAWA 231


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +2

Query: 356 YNQYQGQPAQGPCAWEIKQ---FLECAQQQHDLSLC 454
           Y Q Q  PAQ PCA + +Q      CA  Q D   C
Sbjct: 51  YTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPCAC 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,420,280
Number of Sequences: 27780
Number of extensions: 213377
Number of successful extensions: 537
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)