Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a07f
(442 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 138 5e-32
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 109 3e-23
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 107 1e-22
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 87 2e-16
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 83 2e-15
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 81 1e-14
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 80 2e-14
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 78 1e-13
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 74 2e-12
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 2e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 58 6e-08
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 56 3e-07
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 50 2e-05
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 48 9e-05
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 46 3e-04
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.002
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.096
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.17
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 0.89
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.1
UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5; E... 33 2.7
UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;... 33 3.6
UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3; ... 33 3.6
UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondria... 33 3.6
UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051; ... 32 4.7
UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n... 32 6.3
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 138 bits (334), Expect = 5e-32
Identities = 72/123 (58%), Positives = 83/123 (67%)
Frame = +3
Query: 45 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 224
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 225 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 404
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 405 VKA 413
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 109 bits (261), Expect = 3e-23
Identities = 59/123 (47%), Positives = 73/123 (59%)
Frame = +3
Query: 45 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 224
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 225 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 404
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 405 VKA 413
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 107 bits (256), Expect = 1e-22
Identities = 56/125 (44%), Positives = 72/125 (57%)
Frame = +3
Query: 36 TVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARV 215
T+ KVK +L K + LRV K+ G +SK +I VRK+IARV
Sbjct: 61 TMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRIHDVRKSIARV 120
Query: 216 YIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPR 395
V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+ +K+ FP R
Sbjct: 121 LTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQRKKEIHFPQR 180
Query: 396 VYAVK 410
YAVK
Sbjct: 181 KYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 86.6 bits (205), Expect = 2e-16
Identities = 50/121 (41%), Positives = 64/121 (52%)
Frame = +3
Query: 51 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 230
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 231 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 410
Q+ K R YK PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 411 A 413
A
Sbjct: 142 A 142
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 83.4 bits (197), Expect = 2e-15
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = +3
Query: 54 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 233
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 234 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 362
K + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 81.0 bits (191), Expect = 1e-14
Identities = 49/121 (40%), Positives = 63/121 (52%)
Frame = +3
Query: 45 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 224
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 225 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 404
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 405 V 407
V
Sbjct: 120 V 120
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 79.8 bits (188), Expect = 2e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +3
Query: 132 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 311
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 312 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 413
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 77.8 bits (183), Expect = 1e-13
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 54 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 233
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 234 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 404
+ NL+ Y ++K + P LR K T R AL ++E KT +++R+ FP RVYA
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYA 124
Query: 405 VK 410
VK
Sbjct: 125 VK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 73.7 bits (173), Expect = 2e-12
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = +3
Query: 135 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRA 314
LR KV+ G A KL +I +VRK IA+ V +++ + +++N K+ P+DLR KKTRA
Sbjct: 33 LRTVKVSAGNAQKLGRIGLVRKRIAKFLTVINEQRRNSVKNAAKSSTKLPVDLRGKKTRA 92
Query: 315 MRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 410
+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 93 IRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 2e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +3
Query: 240 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 413
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 58.4 bits (135), Expect = 6e-08
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 132 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 308
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 309 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 410
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 56.4 bits (130), Expect = 3e-07
Identities = 39/106 (36%), Positives = 52/106 (49%)
Frame = +3
Query: 33 VTVKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIAR 212
VTV M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+
Sbjct: 104 VTVAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALRE 162
Query: 213 VYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 350
Y K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 163 AY-------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 50.4 bits (115), Expect = 2e-05
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 45 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 224
MG +K EL K L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 225 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKTRKEIRKKSLFPPRVY 401
+ L+ Y K P+DLR + +++R L K+ K+ ++ R K LF R +
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQESRRHKCLF-ERKF 119
Query: 402 AVKA 413
A+KA
Sbjct: 120 ALKA 123
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 48.0 bits (109), Expect = 9e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +3
Query: 51 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 230
K++ S LR LR K +G V + + I+ +K +AR V
Sbjct: 2 KIEASALRQLGIKQIEERAAEIKADLAALRQKKNSGDVGA--NDIKTAKKNLARALTVRR 59
Query: 231 QKMKVNLRNHYKNKKYK--PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 404
+K+ L Y+ P +LR K R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 60 EKILEELVEAYRGTPVSKLPKELRPKLNRSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 46.4 bits (105), Expect = 3e-04
Identities = 37/92 (40%), Positives = 41/92 (44%)
Frame = -1
Query: 412 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 233
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 232 W*YTM*TRAIAFLTTRILDSLEATPPVTLATR 137
W T+ AIA T IL SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 279 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 398
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.096
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 153 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 326
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 327 LTKHEAKIKTRKEIRKKS 380
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.17
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 135 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 308
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 0.89
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 210 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 365
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 2.1
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 171 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 347
+L K + +K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 348 IKTRKEIRKK 377
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
>UniRef50_Q9I8B0 Cluster: Surfeit locus protein 6 homolog; n=5;
Euteleostomi|Rep: Surfeit locus protein 6 homolog -
Xenopus laevis (African clawed frog)
Length = 341
Score = 33.1 bits (72), Expect = 2.7
Identities = 28/86 (32%), Positives = 43/86 (50%)
Frame = +3
Query: 153 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT 332
TG AS S + ++RK + +K++ + R+ NK P D A+K R RK
Sbjct: 89 TGTAASSFSTVDILRKRL-------QEKIQES-RSQLSNKSLTPED--AEKRRQRRKQ-- 136
Query: 333 KHEAKIKTRKEIRKKSLFPPRVYAVK 410
+ E K + RKE++KK+ P VK
Sbjct: 137 ERERKKRKRKELKKKAAQEPEGNEVK 162
>UniRef50_UPI0000499951 Cluster: hypothetical protein 264.t00009;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 264.t00009 - Entamoeba histolytica HM-1:IMSS
Length = 490
Score = 32.7 bits (71), Expect = 3.6
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +3
Query: 195 RKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRK 374
RKA + ++ + K N+ +K K+Y+ + K+ + K L K +KI RK K
Sbjct: 146 RKAQLKRRMLKKRMSKRNIMKFFKRKQYQSKKISKKQVKKAAKILLKKYSKILARKNNHK 205
Query: 375 KS 380
K+
Sbjct: 206 KT 207
>UniRef50_Q4Z2R9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 819
Score = 32.7 bits (71), Expect = 3.6
Identities = 21/72 (29%), Positives = 35/72 (48%)
Frame = +3
Query: 132 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 311
N+RV + V SK +I ++ K + Y ++ K+ +N Y+N+K K + KT+
Sbjct: 559 NVRVYVLIKNVVSK-KQIDIMNKLEGEQKLRYKERKKIREQNLYRNEKIKDRNGNHLKTK 617
Query: 312 AMRKALTKHEAK 347
L HE K
Sbjct: 618 NEEYYLLPHEKK 629
>UniRef50_Q7Z7F7 Cluster: 39S ribosomal protein L55, mitochondrial
precursor; n=17; Eutheria|Rep: 39S ribosomal protein
L55, mitochondrial precursor - Homo sapiens (Human)
Length = 128
Score = 32.7 bits (71), Expect = 3.6
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 165 ASKLSKIRVVRKAIARVY---IVYHQKMKVNLRNHYKNKKYK-PLDLRAKKTRAMRKALT 332
+S+ S RV R+A AR+Y +V +++R + P+DL R L
Sbjct: 35 SSRASLTRVHRQAYARLYPVLLVKQDGSTIHIRYREPRRMLAMPIDLDTLSPEERRARLR 94
Query: 333 KHEAKIKTRKEIRKK 377
K EA++++RKE ++
Sbjct: 95 KREAQLQSRKEYEQE 109
>UniRef50_UPI0000498AB1 Cluster: hypothetical protein 21.t00051;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 21.t00051 - Entamoeba histolytica HM-1:IMSS
Length = 822
Score = 32.3 bits (70), Expect = 4.7
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 147 KVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNH---YKNKKYKPLDLRAKKTRAM 317
KV V K+SK+ + K + + +KM NLR Y KK L+ + K
Sbjct: 517 KVLRKVQKKMSKVNKLSKKNTKKAQLKVKKMMKNLRKQSKKYAQKKSAKLNKKISKINRR 576
Query: 318 RKALTKHEAKIKTRKEIRKKSL 383
+K K K + K + KK L
Sbjct: 577 KKVSKKINNKRRVNKRLNKKRL 598
>UniRef50_Q06SJ3 Cluster: Chloroplast 30S ribosomal protein S4; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S4 - Stigeoclonium helveticum (Green alga)
Length = 2922
Score = 31.9 bits (69), Expect = 6.3
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 162 VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKAL-TKH 338
V S+L +++ + R Y++ QK+K+ + + YK LDL+ K + + KAL K+
Sbjct: 2235 VFSRLYELKKAKTITERKYVLIKQKLKIF--SLFSALNYKLLDLKEKGSISSSKALELKN 2292
Query: 339 EAKIKTRKEIRKKSLFPPRVYAVKA 413
+ K ++++K F ++KA
Sbjct: 2293 QIIQKISQKMKKVKTFAKFKQSLKA 2317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 334,983,619
Number of Sequences: 1657284
Number of extensions: 5009897
Number of successful extensions: 16252
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16167
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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