Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a05r
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 25 1.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 24 1.3
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.1
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 5.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.3
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 5.3
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 5.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 7.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 7.1
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.1
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.6 bits (51), Expect = 1.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 94 YQYTTYDNTSDFYKNVYY 147
Y+Y+ Y+N +++ K +YY
Sbjct: 89 YKYSNYNNYNNYNKKLYY 106
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/56 (21%), Positives = 29/56 (51%)
Frame = +2
Query: 2 NAIKLTVFRTILIINGHLNLCN*FITHKSRFISTQHMTTLAIFIKMFIISLPKGLK 169
NA LT+ T + ++ +C+ FI+H +S + I++ +++P+ ++
Sbjct: 139 NATVLTI--TAFTVERYIAICHPFISHTMSKLSRAVKFIIVIWLLALCLAVPQAIQ 192
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 329 VVPLAIVMLHSLTIIFTDNRS 267
V+P +ML +LT+++ D+RS
Sbjct: 260 VIPAVTMMLLTLTVLWLDSRS 280
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 94 YQYTTYDNTSDFYKNVYYFLTKRSKMLSYI 183
Y+Y+ Y+N +++ N Y K+ +YI
Sbjct: 322 YKYSNYNNYNNYNNNNYNNYNKKLYYKNYI 351
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/25 (24%), Positives = 15/25 (60%)
Frame = +3
Query: 309 YYCKRNDNVSVPKECFSYLLSLGQI 383
Y + DN+ +P++C + + L ++
Sbjct: 116 YLRRYEDNIFLPEDCLLFTIELDRV 140
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 414 IVFHITFILHTNTHADLSWKV-LNHNSTPTTLPF 512
I+ ++ FILH D+ W++ N P + F
Sbjct: 276 IIANLNFILHLFCLLDVQWRIPFNGIQMPNLMVF 309
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/25 (24%), Positives = 15/25 (60%)
Frame = +3
Query: 309 YYCKRNDNVSVPKECFSYLLSLGQI 383
Y + DN+ +P++C + + L ++
Sbjct: 131 YLRRYEDNIFLPEDCLLFTIELDRV 155
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +3
Query: 429 TFILHTNTHADLSW--KVLNHNSTPT 500
T + H TH +++W + + N+ PT
Sbjct: 172 TIVFHLETHPNVTWYSQCVTFNAFPT 197
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 94 YQYTTYDNTSDFYKNVY 144
Y+Y+ Y+N ++ Y N Y
Sbjct: 89 YKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +1
Query: 94 YQYTTYDNTSDFYKNVY 144
Y+Y+ Y+N ++ Y N Y
Sbjct: 89 YKYSNYNNYNNNYNNNY 105
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.1
Identities = 20/86 (23%), Positives = 34/86 (39%)
Frame = +1
Query: 370 PLDRYNTHKLRSHISLFFTLHSSFTQIHTQIFHGKF*ITTARLQLFLSLFGVTLSVPALK 549
P N K R+ +F LH + +H I+ G + T + S G+T + A+
Sbjct: 32 PEANVNLLKNRTGRYMFTYLHLLYQDVHVMIWIGFGFLMTFLRRYGQSAVGLTFLLGAIL 91
Query: 550 FACGLFRNILDEVL*STSSIISLRFL 627
+ + + S +SLR L
Sbjct: 92 VQVAIICEGVMNIQKDNKSYLSLRSL 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,885
Number of Sequences: 438
Number of extensions: 4817
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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