Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a04f
(546 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000ECC1F7 Cluster: Zinc finger CCHC domain-containi... 37 0.35
UniRef50_A3VLP4 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_A7HNS6 Cluster: S-layer domain protein; n=1; Fervidobac... 34 1.9
UniRef50_A6TLF4 Cluster: Sulfatase; n=1; Alkaliphilus metallired... 34 1.9
UniRef50_Q7RDU0 Cluster: Protein kinase domain, putative; n=7; P... 33 3.3
UniRef50_A6EIU2 Cluster: Putative outer membrane protein; n=1; P... 33 5.7
UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera a... 32 7.5
UniRef50_Q9VAP6 Cluster: CG11877-PA; n=2; Sophophora|Rep: CG1187... 32 7.5
UniRef50_Q4H3X4 Cluster: Transforming growth factor beta superfa... 32 7.5
UniRef50_A7TLB3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.5
UniRef50_Q8YB95 Cluster: MALATE DEHYDROGENASE; n=11; Alphaproteo... 32 9.9
>UniRef50_UPI0000ECC1F7 Cluster: Zinc finger CCHC domain-containing
protein 7.; n=2; Gallus gallus|Rep: Zinc finger CCHC
domain-containing protein 7. - Gallus gallus
Length = 238
Score = 36.7 bits (81), Expect = 0.35
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 207 KHPGHGFKSWSWT*HERCSHFHDCR*RRKKNDETANQR---KREDINHGFQQVKTAD*FY 377
KH GH K W H +C+ +CR +RK + QR R D+ G + +
Sbjct: 110 KHGGHSCKKKPWEEHSKCNK-DECRRKRKSSSRADKQRAKKHRSDVERGHEMEDDFPRGH 168
Query: 378 LKKIANSSRNLHNNV 422
K+ + S+ H ++
Sbjct: 169 HKQTSRGSKKHHKSI 183
>UniRef50_A3VLP4 Cluster: Putative uncharacterized protein; n=1;
Rhodobacterales bacterium HTCC2654|Rep: Putative
uncharacterized protein - Rhodobacterales bacterium
HTCC2654
Length = 476
Score = 35.1 bits (77), Expect = 1.1
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = -2
Query: 377 IKLICCFHLLKSMVDIFPFSLISSFVIFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMP 198
+ LI L + DI F L +S +F PAL T + + P ++ D P
Sbjct: 79 VGLITSIGFLATGGDIEAFMLAASRALFLPALLTAMAVLQAATKSSAPVMRVAGFVVDQP 138
Query: 197 CIKLAGEKLLAFIGNMFGSL 138
+ G +LAF G++FG L
Sbjct: 139 PGRRFG--MLAFAGHLFGIL 156
>UniRef50_A7HNS6 Cluster: S-layer domain protein; n=1;
Fervidobacterium nodosum Rt17-B1|Rep: S-layer domain
protein - Fervidobacterium nodosum Rt17-B1
Length = 441
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 166 ANSFSPASLMQGMSNIQDMASKVGLGPNMNGAAISTIVDSAGKKMTKLLISENGKISTMD 345
AN A + + +SN+QDM ++ LG A +ST +D + + N KIS +D
Sbjct: 307 ANDEEFAKVYEAISNLQDMLARAILGQQEEIANLSTKLDKLNELVVNFSSETNEKISVLD 366
>UniRef50_A6TLF4 Cluster: Sulfatase; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Sulfatase - Alkaliphilus
metalliredigens QYMF
Length = 631
Score = 34.3 bits (75), Expect = 1.9
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Frame = -1
Query: 513 NRGPFYVSVS---IKFA*YYKTFVSHKIRRKDL*HYYANFLMNSLFFLNKI--NLLFSLV 349
+RG F VS+ + F Y +S RR+ + ++Y NFL++SLFF++ + + ++LV
Sbjct: 36 DRGLFLVSLQNLLLIFFIYGMVALSSSSRRRKI-YWYVNFLLSSLFFIDAMYYSHFYTLV 94
Query: 348 EIHG*Y 331
+H Y
Sbjct: 95 PVHSIY 100
>UniRef50_Q7RDU0 Cluster: Protein kinase domain, putative; n=7;
Plasmodium (Vinckeia)|Rep: Protein kinase domain,
putative - Plasmodium yoelii yoelii
Length = 1604
Score = 33.5 bits (73), Expect = 3.3
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +3
Query: 180 ARKLNARHVKHPGHGFKSWSWT*HERCSHFHDCR*RRKKNDETANQRKREDINHGFQQVK 359
A+K NA +++ K W H+R +H HD + R+KK + + K + +G V+
Sbjct: 1433 AKKSNADTLQY----LKKWDLYYHKRRNHKHDKKGRKKKAKKYKGEIK--ESKYGEINVQ 1486
Query: 360 TAD*FYLKKIANSSRNLHNNVKDPS-YVFYD*RKFYNIMQ 476
+ + K N S+N+ N PS Y++ + + NI++
Sbjct: 1487 NSGREQILKKTNKSQNIVINSNTPSEYLYINKQSEENILE 1526
>UniRef50_A6EIU2 Cluster: Putative outer membrane protein; n=1;
Pedobacter sp. BAL39|Rep: Putative outer membrane
protein - Pedobacter sp. BAL39
Length = 994
Score = 32.7 bits (71), Expect = 5.7
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 115 GLEGAA-VPNDPNIFPINANSFSPASLMQGMSNIQDMASKVGLGPNMNGA 261
GL+G++ NDP I +NS +P +L+ SN+ K+ L NMNGA
Sbjct: 817 GLDGSSSTANDPAINKFYSNSPNPTTLLGISSNVS--YKKLSLAVNMNGA 864
>UniRef50_Q057S7 Cluster: Outer membrane protein; n=1; Buchnera
aphidicola str. Cc (Cinara cedri)|Rep: Outer membrane
protein - Buchnera aphidicola subsp. Cinara cedri
Length = 571
Score = 32.3 bits (70), Expect = 7.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 492 SVSIKFA*YYKTFVSHKIRRKDL*-HYYANFLMNSLFFLNKINLL 361
S+ + F Y K F +K ++K L + Y NF N+ F LNK N L
Sbjct: 45 SIKLNFLNYSKNFHLYKNKKKILKLNNYINFSKNNFFSLNKFNFL 89
>UniRef50_Q9VAP6 Cluster: CG11877-PA; n=2; Sophophora|Rep:
CG11877-PA - Drosophila melanogaster (Fruit fly)
Length = 503
Score = 32.3 bits (70), Expect = 7.5
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 220 CPGCLTCLALSLRAKNC*RLSEICSGR*ERPHLLTRTRQ 104
CP C +C A +NC R I + ERP LT +Q
Sbjct: 70 CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108
>UniRef50_Q4H3X4 Cluster: Transforming growth factor beta
superfamily signaling ligand; n=1; Ciona
intestinalis|Rep: Transforming growth factor beta
superfamily signaling ligand - Ciona intestinalis
(Transparent sea squirt)
Length = 546
Score = 32.3 bits (70), Expect = 7.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 285 RRKKNDETANQRKREDINHGFQQVKTAD*FYLKKIANSSRNLHNNVKD 428
++K+ E ++R H +K+AD K+ N+ +NL NVKD
Sbjct: 25 KQKRTTEVVSRRFSNPFFHQSSDIKSADGSMATKLKNAMKNLPENVKD 72
>UniRef50_A7TLB3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 713
Score = 32.3 bits (70), Expect = 7.5
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 61 TYTMTKVAIILLILAAVYGLEGAAVPNDPNI----FPINANSFSPASLMQGMSN 210
T+ K+A++LL+ +V+G+ G+ N P+ +NSFS +S SN
Sbjct: 612 THPKAKIALLLLLFISVFGITGSQALRQRNFQFRRAPLTSNSFSSSSSPNDPSN 665
>UniRef50_Q8YB95 Cluster: MALATE DEHYDROGENASE; n=11;
Alphaproteobacteria|Rep: MALATE DEHYDROGENASE - Brucella
melitensis
Length = 345
Score = 31.9 bits (69), Expect = 9.9
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = -2
Query: 287 ALSTIVEMAAPFMLGPRPTFEAMSWMFDMPCIKLAGEKLLAFIGNMFGSLGTAAPSNPYT 108
A+ST++E+ A M+G R + E + ++ + GE ++AF F + P +P+
Sbjct: 234 AISTMIELLAGIMIGDRTSPEVLDFLGTTTLSPVHGEIIIAFSPEAFAA---GRPGDPFA 290
Query: 107 AAK 99
A+
Sbjct: 291 RAE 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,445,280
Number of Sequences: 1657284
Number of extensions: 9001394
Number of successful extensions: 22612
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22609
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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