Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a04f
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p pro...    32   0.44 
AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-P...    32   0.44 
AY069179-1|AAL39324.1|  546|Drosophila melanogaster GH22722p pro...    31   0.77 
AE014296-1236|AAF50577.2|  546|Drosophila melanogaster CG8596-PA...    31   0.77 

>AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p
           protein.
          Length = 503

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 220 CPGCLTCLALSLRAKNC*RLSEICSGR*ERPHLLTRTRQ 104
           CP C +C A     +NC R   I   + ERP  LT  +Q
Sbjct: 70  CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108


>AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-PA
           protein.
          Length = 503

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 220 CPGCLTCLALSLRAKNC*RLSEICSGR*ERPHLLTRTRQ 104
           CP C +C A     +NC R   I   + ERP  LT  +Q
Sbjct: 70  CPLCHSCSASRFHCRNCVRNGNITHSQAERPESLTEKQQ 108


>AY069179-1|AAL39324.1|  546|Drosophila melanogaster GH22722p
           protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 299 IFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 132
           I +P   T+++     +LGPRP    M WM    C+ ++ G     F+G+++  LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461


>AE014296-1236|AAF50577.2|  546|Drosophila melanogaster CG8596-PA
           protein.
          Length = 546

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -2

Query: 299 IFFPALSTIVEMAAPFMLGPRPTFEAMSWMFDMPCI-KLAGEKLLAFIGNMFGSLGT 132
           I +P   T+++     +LGPRP    M WM    C+ ++ G     F+G+++  LGT
Sbjct: 408 IGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGP---VFVGSIYTRLGT 461


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,772,881
Number of Sequences: 53049
Number of extensions: 417257
Number of successful extensions: 894
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)