Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a03f
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 141 9e-35
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 73 4e-14
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 64 1e-11
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 51 1e-07
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 42 8e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 42 8e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 4e-04
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 38 0.002
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 36 0.005
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 36 0.007
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 35 0.012
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 33 0.027
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 28 1.0
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 28 1.4
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 27 2.4
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 27 2.4
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.4
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 4.1
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 26 5.5
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 25 7.2
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 141 bits (341), Expect = 9e-35
Identities = 74/138 (53%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Frame = +1
Query: 226 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDSFVRIPKEQG 402
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R E+G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 403 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXT 582
++S WRGN ANV+RYFPTQALNFAFKDK+K++F G ++ + ++F
Sbjct: 87 VISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAA 145
Query: 583 SLCFVYPLDFARTRLAAD 636
SL FVY LD+ARTRLA D
Sbjct: 146 SLLFVYSLDYARTRLAND 163
Score = 38.7 bits (86), Expect = 7e-04
Identities = 34/140 (24%), Positives = 56/140 (40%)
Frame = +1
Query: 226 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGL 405
FA + +GG + A S V ++ + L S + ++++ G+VD + + + GL
Sbjct: 132 FAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGL 191
Query: 406 LSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTS 585
+RG +V+ + L F D K V L G + F F S
Sbjct: 192 RGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG-PLEGNFLASFLLGWAVTTGSGVAS 250
Query: 586 LCFVYPLDFARTRLAADVGK 645
YPLD R R+ G+
Sbjct: 251 ----YPLDTIRRRMMMTSGE 266
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 72.9 bits (171), Expect = 4e-14
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFWR 420
L+GG++A VS+TAV+P+ER+K++ QVQ+ ++ Y + + V+I +GL+ F+R
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFR 77
Query: 421 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC-FV 597
GN N +R FP A+ FA + KQ L K + C
Sbjct: 78 GNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERLLFGAIAGAASCATT 133
Query: 598 YPLDFARTRLAAD 636
YPLD ARTRL+ +
Sbjct: 134 YPLDIARTRLSIE 146
Score = 42.3 bits (95), Expect = 6e-05
Identities = 25/92 (27%), Positives = 44/92 (47%)
Frame = +1
Query: 196 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDS 375
K + AD AF K FL GG + + +T P + ++ QV + YK I +
Sbjct: 217 KFFSNADLTAFQKLFL-GGFTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSA 272
Query: 376 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 471
I K +G+ F+RG +N+++ P ++ +
Sbjct: 273 IFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 64.5 bits (150), Expect = 1e-11
Identities = 40/133 (30%), Positives = 66/133 (49%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLS 411
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ + I GL
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 412 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 591
++G+ A + R FP + F ++ ++V + + +T R+ S+
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFL-----SGSLAGTCSVF 132
Query: 592 FVYPLDFARTRLA 630
F YPL+ R RLA
Sbjct: 133 FTYPLELIRVRLA 145
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 51.2 bits (117), Expect = 1e-07
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Frame = +1
Query: 214 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPK 393
DP F++GGI+ VS+T AP++R+K++L + + + + ++ + +
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWN 181
Query: 394 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXX 573
G+ SF+ GN NV++ P ++ F + K+V G+ ++
Sbjct: 182 RNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAG 239
Query: 574 XXTSLCFVYPLDFARTRL-AADVGKG 648
+ F+YP+D + R+ +D+ +G
Sbjct: 240 SVAQM-FIYPVDTLKFRIQCSDLSRG 264
Score = 39.5 bits (88), Expect = 4e-04
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVR-IPKEQGLLSF 414
+LAGG++ +V++ + P++ +K +Q +S+ Q K I+ S + + K G+ +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGY 287
Query: 415 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 507
+RG ++ FP A + + K+ ++G
Sbjct: 288 YRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 41.9 bits (94), Expect = 8e-05
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +1
Query: 232 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQR---YKGIVDSFVRIPKEQG 402
KD +AGG + S VAP++ VK Q Q + G + S I +G
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEG 66
Query: 403 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 522
+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 67 IAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 340 AADQRYKGIVDSFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 519
A Y D+F +I K +GL +F+RG F ++ + F + +K K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 520 KTQF 531
K+ F
Sbjct: 284 KSNF 287
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/96 (28%), Positives = 52/96 (54%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFWR 420
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF++
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 421 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQ 528
G ++ P A+++A + K++ + V K +Q
Sbjct: 268 GIRPRMVVAMPATAVSWAAYEAGKEILI-RVSKTSQ 302
Score = 41.1 bits (92), Expect = 1e-04
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQH-VSKQIAADQRYKGIVDSFVRIPKEQGLLSFW 417
LAG S + + + P++ +K +Q+ + VS+ ++ + IV+S ++I +G+ S W
Sbjct: 24 LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN-----IVNSVIKISSTEGVYSLW 78
Query: 418 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 519
RG + ++ P+ A+ F+ + +K D+
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPDR 112
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 4e-04
Identities = 26/96 (27%), Positives = 43/96 (44%)
Frame = +1
Query: 214 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPK 393
D + F F AG ++ + P++ VK +Q+ V K Y G D +I K
Sbjct: 4 DNIPFPVTFAAGAVAGISEVLTLYPLDVVKTRMQLS-VGKS-----DYNGTFDCLKKIVK 57
Query: 394 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 501
+G +RG ++ P +AL FA D Y +++
Sbjct: 58 NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 595 VYPLDFARTRLAADVGKGD 651
+YPLD +TR+ VGK D
Sbjct: 26 LYPLDVVKTRMQLSVGKSD 44
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 37.5 bits (83), Expect = 0.002
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +1
Query: 223 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQ 399
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K +
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 400 GLLSFWRG 423
GL +F++G
Sbjct: 70 GLAAFYKG 77
Score = 34.3 bits (75), Expect = 0.016
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +1
Query: 217 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKE 396
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I +
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 397 QGLLSFWRG 423
GL +G
Sbjct: 164 YGLSGIMKG 172
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFW 417
FL G ++ ++ PI+ VK +Q ++A + YK + +I + GLL FW
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFW 260
Query: 418 RGNFANVIRYFPTQALNFAFKDKYKQV 498
G + R + + F +K ++
Sbjct: 261 SGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 35.9 bits (79), Expect = 0.005
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 12/111 (10%)
Frame = +1
Query: 175 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVS----KQIA 342
V +T +N SN P + F+AGG++ + A AP++ VK LQ KQ A
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTA 90
Query: 343 ADQ-----RYKGIVDSFV---RIPKEQGLLSFWRGNFANVIRYFPTQALNF 471
+ Y+ +D+ + + +G + +RG N+I P +++NF
Sbjct: 91 KSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINF 141
Score = 29.9 bits (64), Expect = 0.34
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = +1
Query: 250 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFWRGNF 429
GI+ ++ P E V+ L+ S I +Y G++ F + EQG++ + G
Sbjct: 280 GIAKFMAAGIAYPHEVVRTRLRQ---SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLT 336
Query: 430 ANVIRYFPTQALNF 471
A+++R P + F
Sbjct: 337 AHLLRVVPNACILF 350
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 238 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDSFVRIPKEQGLLSF 414
FL+GG++A + T P E +K Q+Q ++K + + YK + +F I + +G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGL 86
Query: 415 WRG 423
RG
Sbjct: 87 QRG 89
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 34.7 bits (76), Expect = 0.012
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFWR 420
LAGGIS+ + + +AP + +K+ +Q+ S + F +++G+ + WR
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS-----------LRPVFKETVQKEGVRALWR 69
Query: 421 GNFANVIRYFPTQALNFAFKDKYKQV 498
GN + Y A F K K +
Sbjct: 70 GNVVAELLYLVYGAAEFVAFSKLKHL 95
Score = 28.3 bits (60), Expect = 1.0
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKEQGLLSFWR 420
L+G I+ A SK + P++ V LQ YK D F+ I + G+ +R
Sbjct: 197 LSGVIAGAGSKAIMFPVDTVVKTLQT--------FPSNYKSFKDCFLSIYRNSGIKGLYR 248
Query: 421 GNFANVIRYFP 453
G ++++ P
Sbjct: 249 GLSVSMLKVAP 259
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 33.5 bits (73), Expect = 0.027
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Frame = +1
Query: 232 KDFLAGGISAAVSKT--AVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDSFVRIPKEQG 402
KD L GG + V K P + +QV K + A K + D + G
Sbjct: 167 KDHLVGGCADGVIKVWDLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSG 226
Query: 403 LLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKKT 525
+ FW G F + + F AL VF G+D+KT
Sbjct: 227 AVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 380 TKESTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 273
T+E+ + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +1
Query: 226 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDSFVRIPKE 396
F K FL ++++ S V ++ +V+ I D+ Y + D F +P+E
Sbjct: 813 FFKPFLQACLTSSFSTPVVLGSRLIESFFEVEDNDLTIQKDELYHLLCDQFATVPRE 869
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 2.4
Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 241 LAGGISAAVSKTAVAPIERVKLLLQV--QHVSKQIAADQRYKGIVDSFVRIPKEQGLLSF 414
+AG + +S T V+PIE + +Q H A + + + D + ++G+L+
Sbjct: 141 IAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANE-VFDGLKLMIHQKGILNL 199
Query: 415 WRGNFANVIRYFPTQALNFAFKDKYKQVFLG 507
W G + R P A + ++ + LG
Sbjct: 200 WSGVSVTLWRDVPFSAFYWWSYERIRLFLLG 230
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.1 bits (57), Expect = 2.4
Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Frame = +1
Query: 196 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDS 375
K L P + L G ++ + +A+ P++ +K QV Y G +
Sbjct: 13 KTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVN--------PNIYPGNIAG 64
Query: 376 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD--KYKQVFLGGVDKKTQF 531
F I ++GL + G +I Y + F + K+K L G K ++
Sbjct: 65 FKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEY 118
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = -2
Query: 646 PYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQRRR 503
P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 145 PVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 75 YEITPNLLFKNQELVFRDPPSACAATPTSTY 167
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 364 IVDSFVRIPKEQGLLSFWRGNFANVIRYFPT 456
++++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 7.2
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 6/89 (6%)
Frame = +1
Query: 136 PRVPQLPPRHIHLVKIT*SNKMSNLADPVAFAKDFLAG----GISAAVSKTAVAPI--ER 297
P PQ P ++I ++ +PV FA L + T P
Sbjct: 96 PTTPQTPKTPKRTIQIVTPKSLNRTCNPVPFATRLLQSTPHRQLFPPTPSTPSTPSYNST 155
Query: 298 VKLLLQVQHVSKQIAADQRYKGIVDSFVR 384
KL L+ + S + + K IV+SF R
Sbjct: 156 AKLSLRKSYRSAGVVGRENEKSIVESFFR 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,416,469
Number of Sequences: 5004
Number of extensions: 46524
Number of successful extensions: 176
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 168
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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