Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a02r
         (745 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7EPD7 Cluster: Putative uncharacterized protein; n=1; ...    38   0.26 
UniRef50_Q2BX04 Cluster: Putative uncharacterized protein; n=2; ...    36   1.1  

>UniRef50_A7EPD7 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 829

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = -2

Query: 333 GYSNGLVGKLMRLNLG*LANTSLLCSAESTTGSESRPTEKNRRKTQWVLSLSTYGDRCL 157
           GYS+G    +M+LN     NTSL  +A+  T SE + T  N     W    +T+  + +
Sbjct: 698 GYSSGYKSPVMKLNASASINTSLQSAADIKTNSEEQSTSNNHTGGDWSRDRTTHDTKAV 756


>UniRef50_Q2BX04 Cluster: Putative uncharacterized protein; n=2;
           Vibrionaceae|Rep: Putative uncharacterized protein -
           Photobacterium sp. SKA34
          Length = 434

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = -2

Query: 639 DLERLTKVTKVMCDR---DSVLRSRDNSIVSFYMTMRNVYRRVCRHLLFAPRKRFGVMRQ 469
           +L+  ++V KV+      D++L S D +    Y     ++R+   HL   P  R G    
Sbjct: 124 ELDEKSEVDKVLFSNSMIDAMLSSADKATQDKYFPSFRLFRKETHHLF--PILRLGDYSW 181

Query: 468 MFEFLNTAAWLKY 430
           +FEFLN  +WL +
Sbjct: 182 LFEFLNQRSWLTH 194


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,555,417
Number of Sequences: 1657284
Number of extensions: 13820374
Number of successful extensions: 29834
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29831
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)