Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a02f
(594 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.36
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.36
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.36
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.36
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.36
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 1.9
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 4.5
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 7.8
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 7.8
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 7.8
AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory recept... 21 7.8
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
Y++ TF K+ T YY+F+ +PC
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
Y++ TF K+ T YY+F+ +PC
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
Y++ TF K+ T YY+F+ +PC
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
Y++ TF K+ T YY+F+ +PC
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLIVPC 222
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.36
Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
Y++ TF K+ T YY+F+ +PC
Sbjct: 198 YVDVTFTIKIRRRTLYYFFNLIVPC 222
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.0 bits (47), Expect = 1.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 395 SLLYITG*VCKCRSCYANI 451
S LY VC C CY+ I
Sbjct: 915 STLYTANVVCICHVCYSTI 933
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 4.5
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = -3
Query: 385 TLKLLFKRCCKIHFIIILVLQFRVLIGTIWNIIRLKTKFLICGD 254
T+ LLF C F ++ +L + + FL+C D
Sbjct: 157 TVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLD 200
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -3
Query: 130 LCHFETRDNN*EVTHID*II 71
+CH ETR N + +D ++
Sbjct: 137 VCHLETRPNQSDNNQLDALV 156
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 355 YNIF*TKVSMYAIKLIIHHWLSMQMQKLLCEHCA*FVYHYTLLTT 489
Y I TK I+ I L + QKL C F+ + TLL T
Sbjct: 315 YRIPVTKTDSMLIRNINLFSLQLAHQKLEFSACGFFLINGTLLHT 359
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 7.8
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +1
Query: 355 YNIF*TKVSMYAIKLIIHHWLSMQMQKLLCEHCA*FVYHYTLLTT 489
Y I TK I+ I L + QKL C F+ + TLL T
Sbjct: 140 YRIPVTKTDSMLIRNINLFSLQLAHQKLEFSACGFFLINGTLLHT 184
>AM292326-1|CAL23138.2| 522|Tribolium castaneum gustatory receptor
candidate 5 protein.
Length = 522
Score = 21.0 bits (42), Expect = 7.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 13 LFDVCTMLNVFSRLCSRVNRLFNLCVLLL 99
L VC L + S N LF VLLL
Sbjct: 191 LKSVCADLCLLSECVDLFNSLFGFLVLLL 219
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,230
Number of Sequences: 336
Number of extensions: 3152
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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