Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a02f
         (594 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0160 + 1382646-1383162,1383255-1383402,1383475-1383958,138...    34   0.074
08_01_0019 - 146078-146761                                             29   3.7  

>01_01_0160 +
           1382646-1383162,1383255-1383402,1383475-1383958,
           1383986-1384084
          Length = 415

 Score = 34.3 bits (75), Expect = 0.074
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +1

Query: 385 YAIKLIIHHWLSMQMQKLLCEHCA*FVYHYTLLTTKHSCQIRGAERY 525
           YA K  + HW    M++        +VY  +++T +H C ++G E+Y
Sbjct: 192 YAHKEAVKHWAVSSMREFTVVKSTNYVYEVSIVT-EHQCHLQGVEKY 237


>08_01_0019 - 146078-146761
          Length = 227

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -3

Query: 373 LFKRCCKIHFIIILVLQFRVLIGTIWNIIR-LKTKFLI 263
           L++RCC   F I+L+L   VLI  +W I+R  K +F +
Sbjct: 17  LYRRCCAAIFGILLLLLLIVLI--VWLILRPTKPRFYL 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,399,106
Number of Sequences: 37544
Number of extensions: 232290
Number of successful extensions: 452
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)