Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a02f
         (594 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.3  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   5.6  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   5.6  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   7.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.8  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    23   9.8  

>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
           Y++ TF  ++   T YY+F+  +PC
Sbjct: 218 YVDITFTIQIRRRTLYYFFNLIVPC 242


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -2

Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
           Y++ TF  ++   T YY+F+  +PC
Sbjct: 218 YVDITFTIQIRRRTLYYFFNLIVPC 242


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 386 YIE-TFV*KML*DTFYYYFSFAIPC 315
           YI+ TF   +   T YY+F+  +PC
Sbjct: 201 YIDITFAILIRRKTLYYFFNLIVPC 225


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 394 KLIIHHWLSMQMQKLLCEHCA 456
           +L+  HW +   Q+L C H A
Sbjct: 731 QLLASHWTAANQQQLNCLHAA 751


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 350 TFYYYFSFAIPC 315
           T YY+F+  +PC
Sbjct: 246 TLYYFFNLIVPC 257


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 193  MDLKIDYKT*IEKKTRNVKKYPHILK 270
            M LK  +K  +EK  +++KKY H+ K
Sbjct: 959  MSLKSLFKE-LEKANQHLKKYNHVNK 983


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 590 Y*RLTGCTSDSG 555
           Y  +TGCT+DSG
Sbjct: 199 YKNVTGCTADSG 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,197
Number of Sequences: 2352
Number of extensions: 11663
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)