Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner12a02f
         (594 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U11441-1|AAA53242.1|  570|Drosophila melanogaster SAX protein.         29   4.8  
U05209-1|AAA18208.1|  570|Drosophila melanogaster serine-threoni...    29   4.8  
L33790-1|AAA61946.1|  570|Drosophila melanogaster receptor prote...    29   4.8  
L33476-1|AAA28878.1|  570|Drosophila melanogaster saxophone prot...    29   4.8  
AE013599-505|AAF59189.1|  570|Drosophila melanogaster CG1891-PA,...    29   4.8  
AY058363-1|AAL13592.1|  535|Drosophila melanogaster GH13369p pro...    28   8.3  
AE013599-506|AAM68863.1|  535|Drosophila melanogaster CG1891-PB,...    28   8.3  

>U11441-1|AAA53242.1|  570|Drosophila melanogaster SAX protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +3

Query: 480 PDYQAQLSNQGS*TLQ------TPQHDVQVYPAVRCASCQP 584
           PD   +LS+  S  L        PQ+ VQ +P  +C SC+P
Sbjct: 32  PDLDMELSSASSAHLNGKELPAVPQNSVQTHPRYKCYSCEP 72


>U05209-1|AAA18208.1|  570|Drosophila melanogaster serine-threonine
           kinase receptor protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +3

Query: 480 PDYQAQLSNQGS*TLQ------TPQHDVQVYPAVRCASCQP 584
           PD   +LS+  S  L        PQ+ VQ +P  +C SC+P
Sbjct: 32  PDLDMELSSASSAHLNGKELPAVPQNSVQTHPRYKCYSCEP 72


>L33790-1|AAA61946.1|  570|Drosophila melanogaster receptor protein
           serine/threoninekinase protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +3

Query: 480 PDYQAQLSNQGS*TLQ------TPQHDVQVYPAVRCASCQP 584
           PD   +LS+  S  L        PQ+ VQ +P  +C SC+P
Sbjct: 32  PDLDMELSSASSAHLNGKELPAVPQNSVQTHPRYKCYSCEP 72


>L33476-1|AAA28878.1|  570|Drosophila melanogaster saxophone protein
           protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +3

Query: 480 PDYQAQLSNQGS*TLQ------TPQHDVQVYPAVRCASCQP 584
           PD   +LS+  S  L        PQ+ VQ +P  +C SC+P
Sbjct: 32  PDLDMELSSASSAHLNGKELPAVPQNSVQTHPRYKCYSCEP 72


>AE013599-505|AAF59189.1|  570|Drosophila melanogaster CG1891-PA,
           isoform A protein.
          Length = 570

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +3

Query: 480 PDYQAQLSNQGS*TLQ------TPQHDVQVYPAVRCASCQP 584
           PD   +LS+  S  L        PQ+ VQ +P  +C SC+P
Sbjct: 32  PDLDMELSSASSAHLNGKELPAVPQNSVQTHPRYKCYSCEP 72


>AY058363-1|AAL13592.1|  535|Drosophila melanogaster GH13369p
           protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 531 PQHDVQVYPAVRCASCQP 584
           PQ+ VQ +P  +C SC+P
Sbjct: 20  PQNSVQTHPRYKCYSCEP 37


>AE013599-506|AAM68863.1|  535|Drosophila melanogaster CG1891-PB,
           isoform B protein.
          Length = 535

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 531 PQHDVQVYPAVRCASCQP 584
           PQ+ VQ +P  +C SC+P
Sbjct: 20  PQNSVQTHPRYKCYSCEP 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,059,063
Number of Sequences: 53049
Number of extensions: 455447
Number of successful extensions: 855
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)