Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner12a01r
(773 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 27 0.26
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 27 0.26
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 26 0.45
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 26 0.45
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 26 0.45
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 26 0.45
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 1.8
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 24 1.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.4
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.4
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.5
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.26
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNII 166
+ Y YNNNN + + YYNII
Sbjct: 94 YKYNYNNNNYNNNNYNKKLYYNII 117
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.26
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNII 166
+ Y YNNNN + + YYNII
Sbjct: 94 YKYNYNNNNYNNNNYNKKLYYNII 117
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 107 YNNNNKSTATHIILEYYNI 163
YNNNN + + L+YYNI
Sbjct: 97 YNNNNYNNNNYKKLQYYNI 115
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 107 YNNNNKSTATHIILEYYNI 163
YNNNN + + L+YYNI
Sbjct: 97 YNNNNYNNNNYKKLQYYNI 115
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 107 YNNNNKSTATHIILEYYNI 163
YNNNN + + L+YYNI
Sbjct: 97 YNNNNYNNNNYKKLQYYNI 115
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.8 bits (54), Expect = 0.45
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 107 YNNNNKSTATHIILEYYNI 163
YNNNN + + L+YYNI
Sbjct: 97 YNNNNYNNNNYKKLQYYNI 115
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +3
Query: 612 VSKYLISLKFYDY*LKIETKFSRHIIFFKY 701
+ K +++ + DY L+ FSR ++FF++
Sbjct: 166 IGKPVVAEETVDYMLEKSGNFSRLVVFFRF 195
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +2
Query: 101 YKYNN----NNKSTATHIILEYYNII 166
YKY+N NN + L+YYNII
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYNII 114
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.4
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +2
Query: 107 YNN-NNKSTATHIILEYYNII 166
YNN NN + L+YYNII
Sbjct: 98 YNNYNNNYNTNYKKLQYYNII 118
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 YKYNNNNKSTATHIILEYYNI 163
YKYN NN + + YYNI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNI 116
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 YKYNNNNKSTATHIILEYYNI 163
YKYN NN + + YYNI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNI 116
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 YKYNNNNKSTATHIILEYYNI 163
YKYN NN + + YYNI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNI 116
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 101 YKYNNNNKSTATHIILEYYNI 163
YKYN NN + + YYNI
Sbjct: 96 YKYNYNNNNYNNNCKKLYYNI 116
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNIIEKSLRIHF 190
+ Y YNNNN + + + Y I + +++
Sbjct: 95 YKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNIIEKSLRIHF 190
+ Y YNNNN + + + Y I + +++
Sbjct: 95 YKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNIIEKSLRIHF 190
+ Y YNNNN + + + Y I + +++
Sbjct: 95 YKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 5.5
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 95 FPYKYNNNNKSTATHIILEYYNIIEKSLRIHF 190
+ Y YNNNN + + + Y I + +++
Sbjct: 95 YKYNYNNNNYNKKLYYNINYIEQIPIPVPVYY 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,838
Number of Sequences: 438
Number of extensions: 3583
Number of successful extensions: 29
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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