Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p24r
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted ...    25   1.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   8.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   8.8  

>DQ370048-1|ABD18609.1|  144|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 144

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 106 CGRFGRPYGIWTRW 65
           C R    YG+WT W
Sbjct: 44  CNRLSNSYGLWTPW 57


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 68  SCPNAIRSPEASTILPS 118
           SC N I+SP+A ++L S
Sbjct: 871 SCVNCIKSPKAVSVLNS 887


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 528 QHXVRKYFXYNVRLXMXGNFVKLIYR 451
           +H  R+Y   N+   + G+FV   +R
Sbjct: 436 EHYYRRYLTANLSSDLSGDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 528 QHXVRKYFXYNVRLXMXGNFVKLIYR 451
           +H  R+Y   N+   + G+FV   +R
Sbjct: 436 EHYYRRYLTANLSSDLSGDFVDAFFR 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,524
Number of Sequences: 2352
Number of extensions: 8712
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)