Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p24f
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   2.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   6.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
 Frame = +3

Query: 141  SRRNCTTASSPVTTT----ALSVRAWNTRTKARAPXXXXXXXXXXXXXVGTPW-STATSC 305
            SR +CT    PVT         V    + T+   P               +PW +T T+ 
Sbjct: 999  SREDCTKPPEPVTPAPPQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTSPWWTTTTTR 1058

Query: 306  GSATDSTLSESTSPITLDSSWP 371
             + T    + ST+     ++WP
Sbjct: 1059 RTTTTRPTTTSTTTRPTTTNWP 1080



 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 285  WSTATSCGSATDSTLSESTSPITLD 359
            W   T C     ST++ ST+P+  D
Sbjct: 2278 WPENTECHPDASSTMAPSTTPMVPD 2302


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 254 NLIIDKSRNTMEYCYKL 304
           +++   SR T E CYKL
Sbjct: 233 DVVASNSRKTAEMCYKL 249


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +2

Query: 347 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 481
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +2

Query: 347 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 481
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 345 GKYFLTMCCPLPTHSL*QYSMVFRLL 268
           G  F T+   +P H+  +Y  VF++L
Sbjct: 263 GSVFNTVLELMPKHACSEYCRVFKML 288


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 266 DKSRNTMEYCYKLWVGNGQHIVRKYFPY 349
           D+  +    CY+L   NGQ I  + F +
Sbjct: 306 DRGESKGSSCYRLLSRNGQFIYLRTFGF 333


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 564 WLYLVLWILKYTLLFSHKVMNFQ 496
           W  L  WI+ YTL    +VM  Q
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQ 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,294
Number of Sequences: 336
Number of extensions: 2738
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)