Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p24f
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   0.50 
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.2  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   6.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 121 HASRGHFSDAGADGEHARREHHEKFHYHSCLFRSLSS 11
           H S  H   A A G H   +HH   H+HS   +  SS
Sbjct: 708 HLSHHHGGAAAATGHH-HHQHHAAPHHHSLQQQHASS 743


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +2

Query: 290 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 397
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +2

Query: 290 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 397
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +2

Query: 245 VVNNLIIDKSRNTMEYCYKLWVG-NGQHIVRKYFP 346
           ++N  I+ + RN+ME+C     G  G  +VR+  P
Sbjct: 85  LLNRKILQRLRNSMEHCMAGSGGLGGGAVVREALP 119


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 503 FITLWENNRVYFKIHNTKYNQYLKLSSTT 589
           FI+ W+   VY+ +H   YN+   +S  T
Sbjct: 392 FISHWQEEGVYWSLHYL-YNRLRDISEET 419


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,817
Number of Sequences: 2352
Number of extensions: 11489
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)