Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p22r
         (389 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    24   0.61 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   7.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   7.5  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 0.61
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -3

Query: 306 PIQXRVIFTEQTVKLINKRDHHALKLXDQQNHNKI 202
           P Q ++ F     K   KR  H   + DQQN+N +
Sbjct: 81  PTQVKIWFQNHRYK--TKRAQHEKGMHDQQNNNPL 113


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 345 WTKDGKEIVKSYFPIQXRVIFTEQTVKLINKRDHHALK 232
           +T   KE++   F +    I+ + T K+I + DH ALK
Sbjct: 642 YTTTEKELLGVIFALHKFRIYIQVT-KIIIRTDHQALK 678


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 144  VLENNRVYFKIMSTEDKQYLKLDNTK 67
            ++E   VY+K +ST+DK  +K  + K
Sbjct: 1230 IVEYYTVYYKPVSTDDKTEVKPTSQK 1255


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
 Frame = +2

Query: 164 TFLLVLSLESPNAILLWFCWSINLRA*WSLLFMSLTVCS--VKITLXW 301
           T+L+    E  +  +LW C S N      +L +S TV    +  T+ W
Sbjct: 242 TYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTVIQEVMLFTILW 289


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 171 CWFCLWSHRMQFCCGFV 221
           C F +++  + FCC F+
Sbjct: 171 CAFIIFTMHLLFCCAFI 187



 Score = 20.2 bits (40), Expect = 7.5
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = +3

Query: 165 LSCWFCLWSHRMQFCCGFV 221
           L C +  +   + FCC F+
Sbjct: 255 LVCIYYFYYMHLLFCCAFI 273


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 121 VYSVVFQHGGKLPGDFLAGFVFGVTECN 204
           +YSV+ Q   K P DF  GF    T C+
Sbjct: 14  IYSVLGQENFKCPDDF--GFYPHHTSCD 39


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 121 VYSVVFQHGGKLPGDFLAGFVFGVTECN 204
           +YSV+ Q   K P DF  GF    T C+
Sbjct: 14  IYSVLGQENFKCPDDF--GFYPHHTSCD 39


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 182 TKPARKSPGSLPPCWKTTEYTSRSCP 105
           T PA   PG LP  W+     S   P
Sbjct: 52  TNPAFFHPGLLPLAWQANSPPSPPAP 77


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 369 TMDFAYQLWTKDG 331
           ++D+A + WTK G
Sbjct: 395 SVDYAVKFWTKKG 407


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 378 KRNTMDFAYQLWTKDG 331
           K+ T+DF+ + W K G
Sbjct: 735 KKLTVDFSAREWVKQG 750


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 175 QQESLLEVYPRVGKQQSIL 119
           Q ESL  +Y + GK+  ++
Sbjct: 403 QNESLTRLYKKAGKEIPVI 421


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 389 SKTARGTPWTSPTS 348
           S   RGTP T+P S
Sbjct: 286 SHNTRGTPRTTPAS 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,652
Number of Sequences: 336
Number of extensions: 1969
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)