Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p22r
         (389 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006108-1|AAH06108.1|  931|Homo sapiens G patch domain containi...    29   5.3  
U14108-1|AAB17720.1|  350|Homo sapiens Mel-1a melatonin receptor...    28   9.3  
BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein pr...    28   9.3  
BC126299-1|AAI26300.1|  350|Homo sapiens melatonin receptor 1A p...    28   9.3  
BC126297-1|AAI26298.1|  350|Homo sapiens melatonin receptor 1A p...    28   9.3  
BC113816-1|AAI13817.1|  234|Homo sapiens MTNR1A protein protein.       28   9.3  
BC074947-1|AAH74947.1|  350|Homo sapiens melatonin receptor 1A p...    28   9.3  
BC074946-1|AAH74946.1|  350|Homo sapiens melatonin receptor 1A p...    28   9.3  
AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.     28   9.3  
AB029933-1|BAA85303.1|  350|Homo sapiens melatonin 1a receptor p...    28   9.3  

>BC006108-1|AAH06108.1|  931|Homo sapiens G patch domain containing
           1 protein.
          Length = 931

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 20/75 (26%), Positives = 36/75 (48%)
 Frame = -3

Query: 279 EQTVKLINKRDHHALKLXDQQNHNKIAFGDSKDKTSKKVSWKFTPVLENNRVYFKIMSTE 100
           +Q+  L+NK + HA +L   Q  NK     ++ + S+     F  +  ++    K  S+E
Sbjct: 712 QQSSPLVNKEEEHAPELSANQTVNKDVDAQAEGEGSRPSMDLFRAIFASSSDE-KSSSSE 770

Query: 99  DKQYLKLDNTKGSSD 55
           D+Q    D+  GS +
Sbjct: 771 DEQGDSEDDQAGSGE 785


>U14108-1|AAB17720.1|  350|Homo sapiens Mel-1a melatonin receptor
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BX537728-1|CAD97821.1|  609|Homo sapiens hypothetical protein
           protein.
          Length = 609

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 325 NRQILLPHPV*SDLHRADCQAHKQKGPS-RPQVDXPTKPQQN 203
           N Q  + H V SD+  +DCQ  K  G S +PQ +   +  +N
Sbjct: 80  NMQGRVDHTVASDIRLSDCQTFKPSGASQQPQSNFEVQSSRN 121


>BC126299-1|AAI26300.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC126297-1|AAI26298.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC113816-1|AAI13817.1|  234|Homo sapiens MTNR1A protein protein.
          Length = 234

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 201 RVFFVDSSNDVADRVKWKPSPLMTNNNV 228


>BC074947-1|AAH74947.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


>BC074946-1|AAH74946.1|  350|Homo sapiens melatonin receptor 1A
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


>AB095938-1|BAC23114.1| 1685|Homo sapiens KIAA2018 protein protein.
          Length = 1685

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 325  NRQILLPHPV*SDLHRADCQAHKQKGPS-RPQVDXPTKPQQN 203
            N Q  + H V SD+  +DCQ  K  G S +PQ +   +  +N
Sbjct: 1156 NMQGRVDHTVASDIRLSDCQTFKPSGASQQPQSNFEVQSSRN 1197


>AB029933-1|BAA85303.1|  350|Homo sapiens melatonin 1a receptor
           protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 207 KIAFGDSKDKTSKKVSWKFTPVLENNRV 124
           ++ F DS +  + +V WK +P++ NN V
Sbjct: 317 RVFFVDSSNDVADRVKWKPSPLMTNNNV 344


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,952,016
Number of Sequences: 237096
Number of extensions: 1145330
Number of successful extensions: 3335
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)