Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11p21r
(730 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p pro... 220 1e-57
AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA ... 220 1e-57
DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosom... 219 4e-57
AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal pr... 214 1e-55
BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p pro... 49 7e-06
BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p pro... 31 2.1
AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA... 31 2.1
AY060371-1|AAL25410.1| 503|Drosophila melanogaster LD23637p pro... 30 2.8
AE014297-3670|AAF56367.1| 863|Drosophila melanogaster CG11168-P... 30 2.8
M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein... 29 8.6
BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p pro... 29 8.6
AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p pro... 29 8.6
AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB... 29 8.6
AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA... 29 8.6
AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD... 29 8.6
AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC... 29 8.6
>BT029645-1|ABL75704.1| 269|Drosophila melanogaster IP17216p
protein.
Length = 269
Score = 220 bits (538), Expect = 1e-57
Identities = 100/133 (75%), Positives = 116/133 (87%)
Frame = -2
Query: 405 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 226
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 225 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 46
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 45 ARDYDALDVANKM 7
ARDYDALD+ANK+
Sbjct: 254 ARDYDALDIANKI 266
>AE014296-329|AAF47545.1| 277|Drosophila melanogaster CG7977-PA
protein.
Length = 277
Score = 220 bits (538), Expect = 1e-57
Identities = 100/133 (75%), Positives = 116/133 (87%)
Frame = -2
Query: 405 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 226
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 225 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 46
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 45 ARDYDALDVANKM 7
ARDYDALD+ANK+
Sbjct: 262 ARDYDALDIANKI 274
>DQ450529-1|ABE27283.1| 277|Drosophila melanogaster L23A ribosomal
protein naturalvariant protein.
Length = 277
Score = 219 bits (534), Expect = 4e-57
Identities = 100/133 (75%), Positives = 115/133 (86%)
Frame = -2
Query: 405 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 226
A K Q+K++KG G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201
Query: 225 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 46
LT+EAAMKKIEDNNTLVF+ H ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261
Query: 45 ARDYDALDVANKM 7
ARDYDALD+ANK+
Sbjct: 262 ARDYDALDIANKI 274
>AF080130-1|AAD19340.1| 269|Drosophila melanogaster ribosomal
protein L23a protein.
Length = 269
Score = 214 bits (522), Expect = 1e-55
Identities = 99/133 (74%), Positives = 115/133 (86%)
Frame = -2
Query: 405 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFP 226
A K Q+K++K G R RKIR +VHFRRP T + PR PKYPRKS+P RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193
Query: 225 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 46
LT+EAAMKKIEDNNTLVF+ H ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253
Query: 45 ARDYDALDVANKM 7
ARDYDALD+ANK+
Sbjct: 254 ARDYDALDIANKI 266
>BT021430-1|AAX33578.1| 290|Drosophila melanogaster GM06171p
protein.
Length = 290
Score = 48.8 bits (111), Expect = 7e-06
Identities = 30/94 (31%), Positives = 47/94 (50%)
Frame = -1
Query: 289 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAPYQGCSQETL*Y 110
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P S + L +
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEPRACRSAQALRH 222
Query: 109 KCC*SQHTHQA*W*EESVXXXXXXXXRIGRCQQN 8
+ + H A W EE + R G CQQ+
Sbjct: 223 QGGQGERAHPARWPEEGLCAPGARLRRPGHCQQD 256
>BT003457-1|AAO39460.1| 985|Drosophila melanogaster RH34107p
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 367 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 459
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AE014297-1126|AAF54512.1| 985|Drosophila melanogaster CG3999-PA
protein.
Length = 985
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 367 MFTFYNLPLSLKCFSNRFHYFFLSLNPSLFG 459
M+ Y+ P LK +NR H+F L+L + G
Sbjct: 368 MYAIYHGPEGLKAMANRIHHFTLTLQTGVLG 398
>AY060371-1|AAL25410.1| 503|Drosophila melanogaster LD23637p
protein.
Length = 503
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/49 (20%), Positives = 30/49 (61%)
Frame = +1
Query: 4 CHFVGNVQCVIISSESYVRFLLTIRPDECVDFSNIYIIEFLDCSLDMVL 150
CH + N+ CV SE +R+ I ++ + + ++++++ L+ + ++++
Sbjct: 431 CHDIENINCVCQDSED-LRYFAYITKEQDLHYCHVFMVDSLELAKEIIM 478
>AE014297-3670|AAF56367.1| 863|Drosophila melanogaster CG11168-PA
protein.
Length = 863
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/49 (20%), Positives = 30/49 (61%)
Frame = +1
Query: 4 CHFVGNVQCVIISSESYVRFLLTIRPDECVDFSNIYIIEFLDCSLDMVL 150
CH + N+ CV SE +R+ I ++ + + ++++++ L+ + ++++
Sbjct: 791 CHDIENINCVCQDSED-LRYFAYITKEQDLHYCHVFMVDSLELAKEIIM 838
>M85049-1|AAA19661.1| 1638|Drosophila melanogaster brahma protein
protein.
Length = 1638
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>BT009972-1|AAQ22441.1| 1634|Drosophila melanogaster RE61274p protein.
Length = 1634
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AY095048-1|AAM11376.1| 1638|Drosophila melanogaster LD36356p protein.
Length = 1638
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2605|AAF49557.1| 1638|Drosophila melanogaster CG5942-PB,
isoform B protein.
Length = 1638
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2604|AAF49558.3| 1638|Drosophila melanogaster CG5942-PA,
isoform A protein.
Length = 1638
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1424 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1482
>AE014296-2603|AAN11774.1| 1634|Drosophila melanogaster CG5942-PD,
isoform D protein.
Length = 1634
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
>AE014296-2602|AAN11773.1| 1634|Drosophila melanogaster CG5942-PC,
isoform C protein.
Length = 1634
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 363 KRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM-DAYNIIKFPLTSEAAMKKIED 190
KR +K + + K + R P LP R R+ D Y IIK P+ + +++IED
Sbjct: 1420 KRSKKQMHKIMSAVIKHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIED 1478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,298,916
Number of Sequences: 53049
Number of extensions: 473924
Number of successful extensions: 1438
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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