Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p20f
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.9  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.9  

>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 301 EIPFYCYLCVIRFVQ 257
           E P+ C LC++RF Q
Sbjct: 103 EKPYECKLCLLRFSQ 117


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 301 EIPFYCYLCVIRFVQ 257
           E P+ C LC++RF Q
Sbjct: 359 EKPYECKLCLLRFSQ 373


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 429 ETTYNSRPW 403
           +T YN RPW
Sbjct: 529 QTVYNHRPW 537


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 42  KYLNIKCEYILDE 80
           KYL IKC+ I +E
Sbjct: 782 KYLEIKCKRIYNE 794


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -1

Query: 546 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 412
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 99  KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 143


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -1

Query: 546 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 412
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 47  KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 91


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/45 (20%), Positives = 17/45 (37%)
 Frame = -1

Query: 546 KYCNACSTSLSTIAQASSEIPSGKYRSRMSRHEPKLMSGETTYNS 412
           K C  C    + +  +  EIP        + + P   +  T +N+
Sbjct: 230 KSCQGCEMPSAGLCGSHDEIPDISSTRGNNNNTPSATNNNTNFNN 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,746
Number of Sequences: 336
Number of extensions: 3426
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)