Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner11p16r
         (760 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.77 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        25   1.0  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               23   3.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   7.2  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.5  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 183 STLNVVPGRTTSSMRDLKPW 124
           STLNV+ G+T    R LKP+
Sbjct: 89  STLNVISGKTGKGGRLLKPY 108


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 573 SAM*TSARGDLACRTTISATTNRHPASS*S*IRSTVG 463
           +A+  +  GD +CR T S   N  PAS+   +  T+G
Sbjct: 136 AAVDAATAGDKSCRYTASLAGNVAPASADPMVNYTLG 172


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/17 (41%), Positives = 7/17 (41%)
 Frame = +1

Query: 610 CGCSGPHQLFCHRACTQ 660
           C C  P    C R C Q
Sbjct: 28  CNCKAPETALCARRCQQ 44


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 314 EHWSHTVPTSPRLPGILLPLHQPRRI 237
           E W  T PT+P  P ++ P    RRI
Sbjct: 442 ERW--TTPTTPHSPLLVAPFGAGRRI 465


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 552 ALMSTSQTFPAGGGSLKS 605
           A+ STS ++P GG S  S
Sbjct: 75  AITSTSPSYPGGGSSSPS 92


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 283 RGFPGYYFPYTNQEGYLSPLV 221
           +GFPG   PYT  +  L  LV
Sbjct: 27  QGFPGKNSPYTVTQAILIALV 47



 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 18  NFIL*LFIYTSIYFFIFCVS 77
           +F + LF+   +Y+ IFC +
Sbjct: 210 SFYIPLFVMIQVYYKIFCAA 229


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 99  INISMCTEPMASSLSYLM 152
           + IS  TEP +S+ SY++
Sbjct: 191 VEISQMTEPSSSTKSYVL 208


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 95  VESTNSRHAEDKEVYRRIYE*LENKIY 15
           +ES NS+   DK+    I + L N ++
Sbjct: 80  IESDNSKEVNDKKEENFIVDRLRNDLF 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,924
Number of Sequences: 438
Number of extensions: 5418
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)