Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner11p16f
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 26 0.35
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 23 2.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 4.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.3
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 21 9.8
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 9.8
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 21 9.8
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.8
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.8 bits (54), Expect = 0.35
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 122 SDLTSLERFNMYYREKEPPLTRSQKVKRFIWNPKTRQF 235
++ S ER +M P T ++ + +W PK RQF
Sbjct: 392 NESVSYERGSMTVSVTSKPSTMERQTQTEVWIPKWRQF 429
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 23.0 bits (47), Expect = 2.4
Identities = 7/17 (41%), Positives = 7/17 (41%)
Frame = -1
Query: 563 CGCSGPHQLFCHRACTQ 513
C C P C R C Q
Sbjct: 28 CNCKAPETALCARRCQQ 44
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 621 ALMSTSQTFPAGGGSLKS 568
A+ STS ++P GG S S
Sbjct: 75 AITSTSPSYPGGGSSSPS 92
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRGIINPEDVMLKRRTG 164
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 176 PLTRSQKVKRFIWNPKTRQFCGRTG 250
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -3
Query: 243 LPQNCLVFGFQMNR 202
LP++CL+F +++R
Sbjct: 126 LPEDCLLFTIELDR 139
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.0 bits (42), Expect = 9.8
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = -3
Query: 564 LWMFWPA 544
LW+FWP+
Sbjct: 220 LWLFWPS 226
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/14 (42%), Positives = 12/14 (85%)
Frame = -3
Query: 243 LPQNCLVFGFQMNR 202
LP++CL+F +++R
Sbjct: 141 LPEDCLLFTIELDR 154
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -3
Query: 471 PGSFPLYQMTLLATSGGVGLKPSPGLVPMMLLSSC 367
P S P Y +S +P+ ++LS C
Sbjct: 823 PASSPRYLSAAATSSTSTSPRPASSTAATLVLSGC 857
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,339
Number of Sequences: 438
Number of extensions: 4287
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -